RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SMIM3Q9BZL3 60 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 C11orf68Q9H3H3 251 aaKnown RBP2.49□□□□□ -2.01
VPS50-209ENST00000467326 CKLFQ9UBR5 152 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 TRAPPC2LQ9UL33 140 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 BAIAP2Q9UQB8 552 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 CYSLTR1Q9Y271 337 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 THSD7AQ9UPZ6 1657 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 TMEM131Q92545 1883 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 LRRK1Q38SD2 2015 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 HECW2Q9P2P5 1572 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 SETD1AO15047 1707 aaKnown RBP2.48□□□□□ -2.01
VPS50-209ENST00000467326 ARAP3Q8WWN8 1544 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 BAZ1BQ9UIG0 1483 aaKnown RBP2.48□□□□□ -2.01
VPS50-209ENST00000467326 MEIKINA0A087WXM9 373 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 IGHV3-49A0A0A0MS15 119 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 TRAV38-1A0A0B4J264 116 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 IGHV5-10-1A0A0J9YXX1 117 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 SMIM31A0A1B0GVY4 71 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 C9JAW5 83 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 K7ERS5 55 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 BPY2O14599 106 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 TP53I11O14683 189 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 SOCS1O15524 211 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 DPM2O94777 84 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 APCSP02743 223 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 IGHV4-34P06331 123 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 UCHL1P09936 223 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 CASP1P29466 404 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 SRIP30626 198 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 S100A11P31949 105 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 RPL35P42766 123 aaKnown RBP2.48□□□□□ -2.01
VPS50-209ENST00000467326 ZNF136P52737 540 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 AKR1C2P52895 323 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 TAS2R30P59541 319 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 PKIAP61925 76 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 PPP3R1P63098 170 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 NEDD8Q15843 81 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 RTL8BQ17RB0 113 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 HSD17B12Q53GQ0 312 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 TMEM69Q5SWH9 247 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 WDR86Q86TI4 376 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 ACBD7Q8N6N7 88 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 OR10D4PQ8NGN7 298 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 ZNF721Q8TF20 911 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 CMBLQ96DG6 245 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 C16orf74Q96GX8 76 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 C14orf144Q96I85 54 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 IP6K3Q96PC2 410 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 AP1S3Q96PC3 154 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 TP53RKQ96S44 253 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 NKX6-2Q9C056 277 aaPredicted RBP2.48□□□□□ -2.01
VPS50-209ENST00000467326 RNF122Q9H9V4 155 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 SND1-IT1Q9HBX3 110 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 PCTPQ9UKL6 214 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 HIGD1AQ9Y241 93 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 AMMECR1Q9Y4X0 333 aaPredicted RBP2.48□□□□□ -2.01
VPS50-209ENST00000467326 OVOS2A0A0G2JMS6 1433 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 ADAMTS13Q76LX8 1427 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 ANKRD36BQ8N2N9 1353 aa2.48□□□□□ -2.01
VPS50-209ENST00000467326 IGHV3OR15-7A0A075B7D8 119 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 TRDV1A0A1B0GX56 115 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 MEIS3P1A6NDR6 274 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 A8MUN3 132 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 IGLL5B9A064 214 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 OVOL1O14753 267 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 IGKV1-39P01597 117 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 IGLV1-47P01700 117 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 HLA-DQB1P01920 261 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 IGKV1D-39P04432 117 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 RBMXP38159 391 aaKnown RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 DAPP51397 102 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 NDUFA6P56556 154 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 RPS11P62280 158 aaKnown RBP eCLIP2.47□□□□□ -2.01
VPS50-209ENST00000467326 HIST1H1AQ02539 215 aaPredicted RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 PLCXD2Q0VAA5 305 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 ENDOGQ14249 297 aaKnown RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 FKBP1CQ5VVH2 108 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 RPL22L1Q6P5R6 122 aaKnown RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 HAGHLQ6PII5 290 aaPredicted RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 RASL11AQ6T310 242 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 ZNF767PQ75MW2 155 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 PCP2Q8IVA1 136 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 C10orf126Q8N4M7 172 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 SUMF2Q8NBJ7 301 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 OR52R1Q8NGF1 315 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 MAGOHBQ96A72 148 aaKnown RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 ERMAPQ96PL5 475 aaPredicted RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 TBL1YQ9BQ87 522 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 SLC25A21Q9BQT8 299 aaPredicted RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 RPP21Q9H633 154 aaKnown RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 C8orf17Q9NRJ1 99 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 ERG28Q9UKR5 140 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 MRPS16Q9Y3D3 137 aaKnown RBP2.47□□□□□ -2.01
VPS50-209ENST00000467326 TECPR2O15040 1411 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 NISCHQ9Y2I1 1504 aa2.47□□□□□ -2.01
VPS50-209ENST00000467326 CCDC180Q9P1Z9 1646 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 UHRF1BP1LA0JNW5 1464 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 CAMSAP2Q08AD1 1489 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 SCAPERQ9BY12 1400 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms