RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 THYN1Q9P016 225 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 FOXA2Q9Y261 457 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-204ENST00000466411 ZNF257Q9Y2Q1 563 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 NUBP2Q9Y5Y2 271 aa5.45□□□□□ -1.54
CLDN4-204ENST00000466411 HUWE1Q7Z6Z7 4374 aaKnown RBP5.45□□□□□ -1.54
CLDN4-204ENST00000466411 IGHV7-81A0A0B4J1V7 117 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 A0A0B4J2A0 478 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 A0A1W2PN81 502 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 C15orf61A6NNL5 157 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 PRAF2O60831 178 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 RAMP3O60896 148 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 RBMXL2O75526 392 aaKnown RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 S1PR2O95136 353 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 KRASP01116 189 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 IGHG4P01861 327 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 HLA-AP01891 365 aaKnown RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 CRYGBP07316 175 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 VSIG10L2P0DP72 767 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 SLC25A6P12236 298 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 HIST1H1BP16401 226 aaKnown RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 AKR1C4P17516 323 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 HLA-GP17693 338 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 CHRNA7P36544 502 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 LPAR6P43657 344 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 ATP5IP56385 69 aaPredicted RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 CX3CL1P78423 397 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 TNXAQ16473 311 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 OR2B11Q5JQS5 317 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 FAAP20Q6NZ36 180 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 NOXA1Q86UR1 476 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 NDUFA11Q86Y39 141 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 RNF152Q8N8N0 203 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 LRTM2Q8N967 370 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 OR4F17Q8NGA8 305 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 OR5AU1Q8NGC0 362 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 OR1L8Q8NGR8 309 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 COQ8AQ8NI60 647 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 SRSF12Q8WXF0 261 aaKnown RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 OR4F4Q96R69 305 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 CLCC1Q96S66 551 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 SDHCQ99643 169 aaPredicted RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 B9D2Q9BPU9 175 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 RTBDNQ9BSG5 229 aaPredicted RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 QTRT1Q9BXR0 403 aaKnown RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 C20orf85Q9H1P6 137 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 ZNF430Q9H8G1 570 aaPredicted RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 GPN1Q9HCN4 374 aaPredicted RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 SHPKQ9UHJ6 478 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 TMED3Q9Y3Q3 217 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 TSSC4Q9Y5U2 329 aaPredicted RBP5.44□□□□□ -1.54
CLDN4-204ENST00000466411 TMEM56-RWDD3S4R434 201 aa5.44□□□□□ -1.54
CLDN4-204ENST00000466411 RBMY1BA6NDE4 496 aaKnown RBP5.43□□□□□ -1.54
CLDN4-204ENST00000466411 RBMY1EA6NEQ0 496 aaKnown RBP5.43□□□□□ -1.54
CLDN4-204ENST00000466411 FAM223BA6NKX1 122 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 NPIPB5A8MRT5 1133 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 FAM90A26D6RGX4 464 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 UPK2O00526 184 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 ATP6V0E1O15342 81 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 SCGB2A1O75556 95 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 DUS4LO95620 317 aaKnown RBP5.43□□□□□ -1.54
CLDN4-204ENST00000466411 PTTG1O95997 202 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 IFNA21P01568 189 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 OR5AC1P0C628 307 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 RBMY1DP0C7P1 496 aaKnown RBP5.43□□□□□ -1.54
CLDN4-204ENST00000466411 TRAPPC2P0DI81 140 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 TRAPPC2BP0DI82 140 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 CNTFRP26992 372 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 RPL27AP46776 148 aaKnown RBP5.43□□□□□ -1.54
CLDN4-204ENST00000466411 SUB1P53999 127 aaKnown RBP eCLIP5.43□□□□□ -1.54
CLDN4-204ENST00000466411 GNB1P62873 340 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 C4orf46Q504U0 113 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 PLET1Q6UQ28 207 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 UNQ5815/PRO19632Q6UWF5 114 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 TMED4Q7Z7H5 227 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 FAM223AQ8IWN6 122 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 MINDY2Q8NBR6 621 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 OR52E5Q8NH55 327 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 WIPF2Q8TF74 440 aaPredicted RBP5.43□□□□□ -1.54
CLDN4-204ENST00000466411 GLYATL2Q8WU03 294 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 CHAC2Q8WUX2 184 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 MRGPRFQ96AM1 343 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 SEC22AQ96IW7 307 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 USMG5Q96IX5 58 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 TP53RKQ96S44 253 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 ATP6V0BQ99437 205 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 GPR61Q9BZJ8 451 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.43□□□□□ -1.54
CLDN4-204ENST00000466411 TMEM14BQ9NUH8 114 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 VSIG4Q9Y279 399 aa5.43□□□□□ -1.54
CLDN4-204ENST00000466411 HECTD4Q9Y4D8 3996 aa5.42□□□□□ -1.54
CLDN4-204ENST00000466411 A0A1B0GU03 582 aa5.42□□□□□ -1.54
CLDN4-204ENST00000466411 TCRBV4S1A1TA0A5B7 111 aa5.42□□□□□ -1.54
CLDN4-204ENST00000466411 SRRM4A7MD48 611 aaKnown RBP5.42□□□□□ -1.54
CLDN4-204ENST00000466411 INS-IGF2F8WCM5 200 aa5.42□□□□□ -1.54
CLDN4-204ENST00000466411 CORTO00230 105 aa5.42□□□□□ -1.54
CLDN4-204ENST00000466411 SCAF4O95104 1147 aaKnown RBP5.42□□□□□ -1.54
CLDN4-204ENST00000466411 TCRBP04435 133 aa5.42□□□□□ -1.54
CLDN4-204ENST00000466411 IL6RP08887 468 aaPredicted RBP5.42□□□□□ -1.54
CLDN4-204ENST00000466411 OR4E1P0C645 316 aa5.42□□□□□ -1.54
CLDN4-204ENST00000466411 OR9G9P0C7N8 305 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms