RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 LSM4Q9Y4Z0 139 aaKnown RBP6.76□□□□□ -1.33
DDR1-242ENST00000465966 HSPB11Q9Y547 144 aa6.76□□□□□ -1.33
DDR1-242ENST00000465966 DNAH3Q8TD57 4116 aa6.76□□□□□ -1.33
DDR1-242ENST00000465966 PIGBOS1A0A0B4J2F0 54 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 A0A1B0GU03 582 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 MSGN1A6NI15 193 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 HMSDA8MTL9 139 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 LEUTXA8MZ59 168 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 LY6LH3BQJ8 138 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 BUB1B-PAK6H3BSN5 160 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 DEDDO75618 318 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 KRASP01116 189 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 APOA2P02652 100 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 IGKV1-16P04430 117 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 FAM106CPP0CH98 169 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 SLC25A6P12236 298 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 CEACAM3P40198 252 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 PRRX1P54821 245 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 SLC35B1P78383 322 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 SMCO1Q147U7 214 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 CXorf66Q5JRM2 361 aaPredicted RBP6.75□□□□□ -1.33
DDR1-242ENST00000465966 CCDC144NLQ6NUI1 221 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 C8orf86Q6ZUL3 223 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 ZNF329Q86UD4 541 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 VKORC1L1Q8N0U8 176 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 KLHL30-AS1Q8NEE0 82 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 OR5AN1Q8NGI8 311 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 THAP6Q8TBB0 222 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 DCUN1D4Q92564 292 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 RRNAD1Q96FB5 475 aaKnown RBP6.75□□□□□ -1.33
DDR1-242ENST00000465966 PRR25Q96S07 402 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 P2RX4Q99571 388 aa6.75□□□□□ -1.33
DDR1-242ENST00000465966 IGHV1-3A0A0C4DH29 117 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 LCE6AA0A183 80 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 A0A1W2PPI3 338 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 SH2D7A6NKC9 451 aaPredicted RBP6.74□□□□□ -1.33
DDR1-242ENST00000465966 L7N2F9 121 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 SSSCA1O60232 199 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 OR9G9P0C7N8 305 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 PET100P0DJ07 73 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 NKX2-1P43699 371 aaPredicted RBP6.74□□□□□ -1.33
DDR1-242ENST00000465966 OR2B8PP59922 312 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 POLR2GP62487 172 aaKnown RBP eCLIP6.74□□□□□ -1.33
DDR1-242ENST00000465966 ZNF345Q14585 488 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 POU2AF1Q16633 256 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 RTL8BQ17RB0 113 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 TPTE2P1Q5T6R2 138 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 C9orf66Q5T8R8 295 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 TMEM65Q6PI78 240 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 SSX9Q7RTT3 188 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 ZNF546Q86UE3 836 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 PDPNQ86YL7 162 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 COMMD1Q8N668 190 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 DMBX1Q8NFW5 382 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 MAGT1Q9H0U3 335 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 TMEM140Q9NV12 185 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 COA4Q9NYJ1 87 aa6.74□□□□□ -1.33
DDR1-242ENST00000465966 IGHV3-72A0A0B4J1Y9 119 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 TRAV3A0A0B4J244 114 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 H7C2Y5 167 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 CCL24O00175 119 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 ST8SIA3O43173 380 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 TXNL1O43396 289 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 ATG12O94817 140 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 TMEM50AO95807 157 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 AMY1AP04745 511 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 SAA1P0DJI8 122 aaPredicted RBP6.73□□□□□ -1.33
DDR1-242ENST00000465966 RRASP10301 218 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 NQO2P16083 231 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 ERVK-16P61578 105 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 IFITM2Q01629 132 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 ID3Q02535 119 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 TMEM177Q53S58 311 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 OR4A47Q6IF82 309 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 TMUB2Q71RG4 321 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 H2BFWTQ7Z2G1 175 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 KCNRGQ8N5I3 272 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 RPEQ96AT9 228 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 HARBI1Q96MB7 349 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 RCHY1Q96PM5 261 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 AQP10Q96PS8 301 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 MFFQ9GZY8 342 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 NSG2Q9Y328 171 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 MOB4Q9Y3A3 225 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 WASHC3Q9Y3C0 194 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 SMAD5-AS1Q9Y6J3 95 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 DNAH9Q9NYC9 4486 aa6.73□□□□□ -1.33
DDR1-242ENST00000465966 FAM90A9PA6NNJ1 464 aa6.72□□□□□ -1.33
DDR1-242ENST00000465966 C15orf61A6NNL5 157 aa6.72□□□□□ -1.33
DDR1-242ENST00000465966 SRRM4A7MD48 611 aaKnown RBP6.72□□□□□ -1.33
DDR1-242ENST00000465966 OOSP1A8MZH6 123 aa6.72□□□□□ -1.33
DDR1-242ENST00000465966 E5RGE8 158 aa6.72□□□□□ -1.33
DDR1-242ENST00000465966 BCL2L11O43521 198 aa6.72□□□□□ -1.33
DDR1-242ENST00000465966 IGLV2-23P01705 113 aa6.72□□□□□ -1.33
DDR1-242ENST00000465966 GAPDHP04406 335 aaKnown RBP6.72□□□□□ -1.33
DDR1-242ENST00000465966 AP2S1P53680 142 aaPredicted RBP6.72□□□□□ -1.33
DDR1-242ENST00000465966 PAX9P55771 341 aa6.72□□□□□ -1.33
DDR1-242ENST00000465966 TAGLNQ01995 201 aaKnown RBP6.72□□□□□ -1.33
DDR1-242ENST00000465966 TNFRSF9Q07011 255 aa6.72□□□□□ -1.33
DDR1-242ENST00000465966 OR2F1Q13607 317 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms