RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 DLEU1O43261 78 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 IFNA7P01567 189 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 HLA-DQA1P01909 254 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 ADRA2AP08913 450 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 OGNP20774 298 aaKnown RBP2.46□□□□□ -2.02
ITGB1-208ENST00000464001 RPS4Y1P22090 263 aaKnown RBP2.46□□□□□ -2.02
ITGB1-208ENST00000464001 SRIP30626 198 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 OPRM1P35372 400 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 OPRK1P41145 380 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 GABRA2P47869 451 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 PIGPP57054 158 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 FGF12P61328 243 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 HBA1P69905 142 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 ENDOGQ14249 297 aaKnown RBP2.46□□□□□ -2.02
ITGB1-208ENST00000464001 GLT8D1Q68CQ7 371 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 Q6Q795 121 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 AGTRAPQ6RW13 159 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 WDR86Q86TI4 376 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 OR10G2Q8NGC3 310 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 OR8A1Q8NGG7 326 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 OR4K13Q8NH42 304 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 MALSU1Q96EH3 234 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 NRTNQ99748 197 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 C2orf88Q9BSF0 95 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 PBOV1Q9GZY1 135 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 C21orf62Q9NYP8 219 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 HSPB8Q9UJY1 196 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF222Q9UK12 451 aa2.46□□□□□ -2.02
ITGB1-208ENST00000464001 PLXNB1O43157 2135 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 CCDC171Q6TFL3 1326 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 IGHV3-43A0A0B4J1X8 118 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 TRAV41A0A0B4J266 112 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 A0A1B0GX51 115 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 A0A1W2PP18 115 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 TMEM189A5PLL7 270 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 ATP6V1G2-DDX39BF2Z307 99 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 TRAPPC2LH3BP13 241 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 J3QRK9 145 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 CYB5BO43169 146 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 SULT1C4O75897 302 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 GADD45GO95257 159 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 OR5AC1P0C628 307 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 SDC4P31431 198 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 LPAR6P43657 344 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 RPS10P46783 165 aaKnown RBP2.45□□□□□ -2.02
ITGB1-208ENST00000464001 HTR4Q13639 388 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 FER1L6-AS1Q8NA97 138 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 CARD19Q96LW7 228 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 SPIN2AQ99865 258 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 SPIN2BQ9BPZ2 258 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 CHCHD7Q9BUK0 85 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 C20orf27Q9GZN8 174 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 TMEM126AQ9H061 195 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 IFI27L2Q9H2X8 130 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 CACYBPQ9HB71 228 aaKnown RBP2.45□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF586Q9NXT0 402 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 AK3Q9UIJ7 227 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 PCTPQ9UKL6 214 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 TRAPPC2LQ9UL33 140 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 HEATR5AQ86XA9 2040 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 AHDC1Q5TGY3 1603 aaPredicted RBP2.45□□□□□ -2.02
ITGB1-208ENST00000464001 THADAQ6YHU6 1953 aa2.45□□□□□ -2.02
ITGB1-208ENST00000464001 PTPRSQ13332 1948 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 PTPRGP23470 1445 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 TRAV9-1A0A075B6T8 112 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 IGHV3OR15-7A0A075B7D8 119 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 IGLL5B9A064 214 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 H7BYZ3 331 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF73O43830 326 aaPredicted RBP2.44□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF324O75467 553 aaPredicted RBP2.44□□□□□ -2.02
ITGB1-208ENST00000464001 CD7P09564 240 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 UBBP0CG47 229 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF705DP0CH99 300 aaPredicted RBP2.44□□□□□ -2.02
ITGB1-208ENST00000464001 CD200P41217 278 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 EVX1P49640 407 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 NUDT2P50583 147 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 RPS11P62280 158 aaKnown RBP eCLIP2.44□□□□□ -2.02
ITGB1-208ENST00000464001 RPS28P62857 69 aaKnown RBP2.44□□□□□ -2.02
ITGB1-208ENST00000464001 HOXC5Q00444 222 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 SCXQ7RTU7 201 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 AMN1Q8IY45 258 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF433Q8N7K0 673 aaPredicted RBP2.44□□□□□ -2.02
ITGB1-208ENST00000464001 OR10D4PQ8NGN7 298 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 TOMM6Q96B49 74 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 CMBLQ96DG6 245 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 ADAT3Q96EY9 351 aaPredicted RBP2.44□□□□□ -2.02
ITGB1-208ENST00000464001 POPDC3Q9HBV1 291 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 FAM60AQ9NP50 221 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 TVP23BQ9NYZ1 205 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 PHLDA3Q9Y5J5 127 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 MYH6P13533 1939 aa2.44□□□□□ -2.02
ITGB1-208ENST00000464001 NYNRINQ9P2P1 1898 aaKnown RBP2.43□□□□□ -2.02
ITGB1-208ENST00000464001 KIF26AQ9ULI4 1882 aaPredicted RBP2.43□□□□□ -2.02
ITGB1-208ENST00000464001 KDM5BQ9UGL1 1544 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 PRDM2Q13029 1718 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 BORCS7-ASMTA0A0B4J1R7 106 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 DUXBA0A1W2PPF3 345 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 TMEM223A0PJW6 202 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 C9JCJ5 164 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms