RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 XAGE1AQ9HD64 81 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 CYSLTR1Q9Y271 337 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 UTP11Q9Y3A2 253 aaKnown RBP1.99□□□□□ -2.09
GPNMB-205ENST00000463011 OTOFQ9HC10 1997 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 DSCAML1Q8TD84 2053 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 RTL1A6NKG5 1358 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 ITGB4P16144 1822 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 NACADO15069 1562 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 GPR179Q6PRD1 2367 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 UNC13AQ9UPW8 1703 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 DICER1Q9UPY3 1922 aaKnown RBP1.98□□□□□ -2.09
GPNMB-205ENST00000463011 E7EQL1 145 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 H3BT86 120 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 PGRMC1O00264 195 aaKnown RBP1.98□□□□□ -2.09
GPNMB-205ENST00000463011 ATG12O94817 140 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 S1PR2O95136 353 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 RBP1P09455 135 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 P0C880 135 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 SMIM17P0DL12 118 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 SMIM10L2AP0DMW4 78 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 SMIM10L2BP0DMW5 78 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 CCL5P13501 91 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 CD24P25063 80 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 ERP29P30040 261 aaKnown RBP1.98□□□□□ -2.09
GPNMB-205ENST00000463011 MEF2BQ02080 365 aaPredicted RBP1.98□□□□□ -2.09
GPNMB-205ENST00000463011 FOXF1Q12946 379 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 POU6F1Q14863 301 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 ZNF705AQ6ZN79 300 aaPredicted RBP1.98□□□□□ -2.09
GPNMB-205ENST00000463011 ZNF767PQ75MW2 155 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 LHFPL1Q86WI0 220 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 OR51T1Q8NGJ9 327 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 FAM172AQ8WUF8 416 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 TOMM6Q96B49 74 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 DERL1Q9BUN8 251 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 NAT8Q9UHE5 227 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 TIMM22Q9Y584 194 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 V9GYQ6 96 aa1.98□□□□□ -2.09
GPNMB-205ENST00000463011 TRGV5A0A0B4J1U4 118 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 A0A0J9YW62 118 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 ODF3BA8MYP8 253 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 C2orf74A8MZ97 194 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 CREBL2O60519 120 aaPredicted RBP1.97□□□□□ -2.09
GPNMB-205ENST00000463011 C8GP07360 202 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 UCHL1P09936 223 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 GABRA4P48169 554 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 TAS2R41P59536 307 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 HSPE1P61604 102 aaKnown RBP1.97□□□□□ -2.09
GPNMB-205ENST00000463011 RPL18Q07020 188 aaKnown RBP1.97□□□□□ -2.09
GPNMB-205ENST00000463011 MOGQ16653 247 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 KRTAP13-3Q3SY46 172 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 RPL22L1Q6P5R6 122 aaKnown RBP1.97□□□□□ -2.09
GPNMB-205ENST00000463011 Q6ZS52 159 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 GOLT1AQ6ZVE7 132 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 SLC35E3Q7Z769 313 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 LYPD1Q8N2G4 141 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 OR11H6Q8NGC7 330 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 OR13C4Q8NGS5 318 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 SLC25A40Q8TBP6 338 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 H1FXQ92522 213 aaKnown RBP1.97□□□□□ -2.09
GPNMB-205ENST00000463011 ZNF471Q9BX82 626 aaPredicted RBP1.97□□□□□ -2.09
GPNMB-205ENST00000463011 TRABDQ9H4I3 376 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 FAM215AQ9Y5M1 114 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 CACNA1SQ13698 1873 aa1.97□□□□□ -2.09
GPNMB-205ENST00000463011 SEC16AO15027 2179 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 TRAPPC13A5PLN9 417 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 SDHAF1A6NFY7 115 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 IFNA1P01562 189 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 IGHV3-7P01780 117 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 LGALS1P09382 135 aaKnown RBP1.96□□□□□ -2.1
GPNMB-205ENST00000463011 OR4E1P0C645 316 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 DEFA4P12838 97 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 GZMHP20718 246 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 PPIBP23284 216 aaKnown RBP1.96□□□□□ -2.1
GPNMB-205ENST00000463011 MSNP26038 577 aaKnown RBP1.96□□□□□ -2.1
GPNMB-205ENST00000463011 ALDH3A1P30838 453 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 RPL28P46779 137 aaKnown RBP1.96□□□□□ -2.1
GPNMB-205ENST00000463011 TPI1P60174 286 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 HIST1H4AP62805 103 aaKnown RBP1.96□□□□□ -2.1
GPNMB-205ENST00000463011 DR1Q01658 176 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 IBA57Q5T440 356 aaKnown RBP1.96□□□□□ -2.1
GPNMB-205ENST00000463011 TRIQKQ629K1 86 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 SMIM20Q8N5G0 67 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 C12orf45Q8N5I9 185 aaPredicted RBP1.96□□□□□ -2.1
GPNMB-205ENST00000463011 SLC7A6Q92536 515 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 C20orf27Q9GZN8 174 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 TUBA4BQ9H853 241 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 MRPL40Q9NQ50 206 aaKnown RBP1.96□□□□□ -2.1
GPNMB-205ENST00000463011 SS18L2Q9UHA2 77 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 NLRC5Q86WI3 1866 aa1.96□□□□□ -2.1
GPNMB-205ENST00000463011 DSCAMO60469 2012 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 MIA2Q96PC5 1412 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 SIGLEC16A6NMB1 481 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 FABP5P3A8MUU1 101 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 CLDN25C9JDP6 229 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 ZNF73O43830 326 aaPredicted RBP1.95□□□□□ -2.1
GPNMB-205ENST00000463011 PPBPP02775 128 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 SULT1A3P0DMM9 295 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 SULT1A4P0DMN0 295 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 CRYBA4P53673 196 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms