RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 PRAF2O60831 178 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 MED6O75586 246 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 DUS4LO95620 317 aaKnown RBP5□□□□□ -1.61
SF3B1-206ENST00000462613 IGKV1-39P01597 117 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 IGLV1-40P01703 118 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 IGKV1D-39P04432 117 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 APELAP0DMC3 54 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 PSMB8P28062 276 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 PPIFP30405 207 aaKnown RBP5□□□□□ -1.61
SF3B1-206ENST00000462613 BTCP35070 178 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 CDX1P47902 265 aaPredicted RBP5□□□□□ -1.61
SF3B1-206ENST00000462613 HOXA1P49639 335 aaPredicted RBP5□□□□□ -1.61
SF3B1-206ENST00000462613 RAB9AP51151 201 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 HSPE1P61604 102 aaKnown RBP5□□□□□ -1.61
SF3B1-206ENST00000462613 DHRS2Q13268 280 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 SMCO1Q147U7 214 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 C10orf55Q5SWW7 151 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 LYG2Q86SG7 212 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 NOXA1Q86UR1 476 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 FAM223AQ8IWN6 122 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 SELENOHQ8IZQ5 122 aaKnown RBP5□□□□□ -1.61
SF3B1-206ENST00000462613 TTC9CQ8N5M4 171 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 MINDY2Q8NBR6 621 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 OR1S1Q8NH92 325 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 WIPF2Q8TF74 440 aaPredicted RBP5□□□□□ -1.61
SF3B1-206ENST00000462613 DPF1Q92782 380 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 UBE2E2Q96LR5 201 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 HIPK2Q9H2X6 1198 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 TMEM14BQ9NUH8 114 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 NSG2Q9Y328 171 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 FBXO7Q9Y3I1 522 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 CUBNO60494 3623 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 TRAV3A0A0B4J244 114 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 TEX50A0A1B0GTY4 177 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 A0A1B0GU03 582 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 C9orf170A2RU37 121 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 HMX3A6NHT5 357 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 CEBPZOSA8MTT3 80 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 CORTO00230 105 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 ST8SIA3O43173 380 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 SCGB2A1O75556 95 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 BRI3O95415 125 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 LY86O95711 162 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 PTTG1O95997 202 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 IGKV1-5P01602 117 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 RPLP1P05386 114 aaKnown RBP4.99□□□□□ -1.61
SF3B1-206ENST00000462613 IL6RP08887 468 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-206ENST00000462613 HOXB5P09067 269 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 OR13C7P0DN81 318 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 ANXA7P20073 488 aaKnown RBP4.99□□□□□ -1.61
SF3B1-206ENST00000462613 PSMB6P28072 239 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 SPCS3P61009 180 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 SUPT4H1P63272 117 aaKnown RBP4.99□□□□□ -1.61
SF3B1-206ENST00000462613 RPP30P78346 268 aaKnown RBP4.99□□□□□ -1.61
SF3B1-206ENST00000462613 PRCDQ00LT1 54 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 CFHR3Q02985 330 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 ATP5G2Q06055 141 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 SRSF4Q08170 494 aaKnown RBP4.99□□□□□ -1.61
SF3B1-206ENST00000462613 DCTN2Q13561 401 aaKnown RBP4.99□□□□□ -1.61
SF3B1-206ENST00000462613 C10orf99Q6UWK7 81 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 RNF152Q8N8N0 203 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 LRTM2Q8N967 370 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 UXS1Q8NBZ7 420 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 NECAP1Q8NC96 275 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 DUSP18Q8NEJ0 188 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 OR52E5Q8NH55 327 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 C4orf3Q8WVX3 66 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 CXorf58Q96LI9 332 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 MS4A10Q96PG2 267 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 HEYLQ9NQ87 328 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-206ENST00000462613 NDUFA4L2Q9NRX3 87 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 CACNG5Q9UF02 275 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 TBC1D24Q9ULP9 559 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 FLVCR2Q9UPI3 526 aa4.99□□□□□ -1.61
SF3B1-206ENST00000462613 TEX22C9J3V5 150 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 FAM90A26D6RGX4 464 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 INMT-MINDY4F8WBC2 141 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 REG1AP05451 166 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 CRYGCP07315 174 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 OR8U8P0C7N1 319 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 EGR2P11161 476 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-206ENST00000462613 SLC25A6P12236 298 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 AREGP15514 252 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 CTRB1P17538 263 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 CD33P20138 364 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 ZP3P21754 424 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 MYCNOSP40205 109 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 SSBP2P81877 361 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-206ENST00000462613 RHOGP84095 191 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 MRGPRG-AS1Q2M3A8 158 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 C19orf54Q5BKX5 351 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 CTRB2Q6GPI1 263 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 SLC25A24Q6NUK1 477 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 LCNL1Q6ZST4 164 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 LYZL2Q7Z4W2 148 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 NRARPQ7Z6K4 114 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 ZNF491Q8N8L2 437 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 LHFPL5Q8TAF8 219 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 ZNF431Q8TF32 576 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-206ENST00000462613 EEF1AKMT3Q96AZ1 226 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms