RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 MRPL32Q9BYC8 188 aaKnown RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 COMMD5Q9GZQ3 224 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 NCOR1P1Q9H4R4 102 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 GNB4Q9HAV0 340 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 LPAR2Q9HBW0 351 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 MSL2Q9HCI7 577 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 SEPSECSQ9HD40 501 aaKnown RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 GCM1Q9NP62 436 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF331Q9NQX6 463 aaPredicted RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 SERTAD4Q9NUC0 356 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM14BQ9NUH8 114 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 IDI2-AS1Q9NZ38 188 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 NAT8BQ9UHF3 227 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 IL17BQ9UHF5 180 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 FBXL7Q9UJT9 491 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 TP53TG3Q9ULZ0 132 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 FZR1Q9UM11 496 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF257Q9Y2Q1 563 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CBY1Q9Y3M2 126 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 TBL2Q9Y4P3 447 aaKnown RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 TRANK1O15050 2925 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 KIF26BQ2KJY2 2108 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 IGHV3OR15-7A0A075B7D8 119 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 TRAV3A0A0B4J244 114 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 IGHV1-18A0A0C4DH31 117 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 KBTBD11-OT1A0A1B0GTJ5 212 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 A0A1W2PRE2 83 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 SMIM27A0A1W2PRY6 76 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 A0A1W2PS18 150 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 NKX6-3A6NJ46 265 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 A6NNC1 897 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 PRR33A8MZF0 331 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 SRRM5B3KS81 715 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 GGTLC3B5MD39 225 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 J3QR06 171 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 UPK2O00526 184 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 COX7A2P2O60397 106 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF324O75467 553 aaPredicted RBP2.89□□□□□ -1.95
COL8A1-204ENST00000462604 IGLV1-44P01699 117 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 IGHG3P01860 377 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 APOA2P02652 100 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 LINC00869P0C866 280 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 C8orf88P0DMB2 117 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 SFTPCP11686 197 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 NTF3P20783 257 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 USF1P22415 310 aaPredicted RBP2.89□□□□□ -1.95
COL8A1-204ENST00000462604 CHRNB4P30926 498 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 CFHR2P36980 270 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 PPOXP50336 477 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 TCL1AP56279 114 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 LOXL3P58215 753 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 LINC00310P59036 64 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 LINC00205P59089 165 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 OR5I1Q13606 314 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 FXYD3Q14802 87 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 GUSBP1Q15486 140 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 PMCHL1Q16048 86 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 LPAL2Q16609 132 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 POU2AF1Q16633 256 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 KRTCAP3Q53RY4 240 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 C2orf83Q53S99 150 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 IBA57Q5T440 356 aaKnown RBP2.89□□□□□ -1.95
COL8A1-204ENST00000462604 STUMQ69YW2 141 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 MRPL54Q6P161 138 aaKnown RBP2.89□□□□□ -1.95
COL8A1-204ENST00000462604 RASL11AQ6T310 242 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 Q6ZN92 141 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 BHLHA15Q7RTS1 189 aaPredicted RBP2.89□□□□□ -1.95
COL8A1-204ENST00000462604 MOGAT3Q86VF5 341 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 DOLPP1Q86YN1 238 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 C1orf210Q8IVY1 113 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 LYG1Q8N1E2 194 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 C11orf42Q8N5U0 333 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 C9orf106Q8NAJ2 232 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 ST6GALNAC3Q8NDV1 305 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 OR1L8Q8NGR8 309 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 OR5B3Q8NH48 314 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 WIPF2Q8TF74 440 aaPredicted RBP2.89□□□□□ -1.95
COL8A1-204ENST00000462604 DDB2Q92466 427 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 NEUROG1Q92886 237 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 SARAFQ96BY9 339 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 PLPPR2Q96GM1 343 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 GRAMD2BQ96HH9 432 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF714Q96N38 554 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 RBM14Q96PK6 669 aaKnown RBP2.89□□□□□ -1.95
COL8A1-204ENST00000462604 NABP2Q9BQ15 211 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 RNASE7Q9H1E1 156 aaKnown RBP2.89□□□□□ -1.95
COL8A1-204ENST00000462604 SAP30LQ9HAJ7 183 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 NRN1Q9NPD7 142 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM160Q9NX00 188 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 MRPL27Q9P0M9 148 aaKnown RBP2.89□□□□□ -1.95
COL8A1-204ENST00000462604 CDC42EP3Q9UKI2 254 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 PROCRQ9UNN8 238 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 ZFP30Q9Y2G7 519 aa2.89□□□□□ -1.95
COL8A1-204ENST00000462604 TRAV17A0A0B4J275 112 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 A0A1W2PN81 502 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 A0A1W2PNU3 283 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 DPRXA6NFQ7 191 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 F2Z2F3 143 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 BMPR1BO00238 502 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 DLL1O00548 723 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms