RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 A8MWP6 167 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 TPPPO94811 219 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 KRASP01116 189 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 OR13C7P0DN81 318 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 ELK1P19419 428 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 PTBP1P26599 531 aaKnown RBP eCLIP14.28□□□□□ -0.12
VARS-220ENST00000461874 TSPAN5P62079 268 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 WT1-ASQ06250 92 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 LINC00322Q6ZN03 302 aaPredicted RBP14.28□□□□□ -0.12
VARS-220ENST00000461874 HSD17B13Q7Z5P4 300 aaPredicted RBP14.28□□□□□ -0.12
VARS-220ENST00000461874 GDPD1Q8N9F7 314 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 CACNG8Q8WXS5 425 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 PLEKHA3Q9HB20 300 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 NDUFA4L2Q9NRX3 87 aa14.28□□□□□ -0.12
VARS-220ENST00000461874 CYB5BO43169 146 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 HPGDSO60760 199 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 SERPINE2P07093 398 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 CD7P09564 240 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 LYL1P12980 280 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 RCVRNP35243 200 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 G6PCP35575 357 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 RORCP51449 518 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 GUCA2BQ16661 112 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 PHLDA2Q53GA4 152 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 LPCAT3Q6P1A2 487 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 VN1R17PQ8TDU5 208 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 WDR89Q96FK6 387 aaPredicted RBP14.27□□□□□ -0.13
VARS-220ENST00000461874 EDA2RQ9HAV5 297 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 NSG2Q9Y328 171 aa14.27□□□□□ -0.13
VARS-220ENST00000461874 SNAPC5O75971 98 aa14.26□□□□□ -0.13
VARS-220ENST00000461874 GPR183P32249 361 aa14.26□□□□□ -0.13
VARS-220ENST00000461874 UNQ9165/PRO28630Q6UXU0 137 aa14.26□□□□□ -0.13
VARS-220ENST00000461874 UXS1Q8NBZ7 420 aa14.26□□□□□ -0.13
VARS-220ENST00000461874 FAM212BQ9NTI7 297 aaPredicted RBP14.26□□□□□ -0.13
VARS-220ENST00000461874 OR51B2Q9Y5P1 312 aa14.26□□□□□ -0.13
VARS-220ENST00000461874 S100GP29377 79 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 UCP3P55916 312 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 CTF1Q16619 201 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 TM4SF20Q53R12 229 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 ZNF57Q68EA5 555 aaPredicted RBP14.25□□□□□ -0.13
VARS-220ENST00000461874 SLC25A24Q6NUK1 477 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 PLET1Q6UQ28 207 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 TMEM61Q8N0U2 210 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 DEFB125Q8N687 156 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 LSM10Q969L4 123 aaKnown RBP14.25□□□□□ -0.13
VARS-220ENST00000461874 HINT2Q9BX68 163 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 NAA50Q9GZZ1 169 aaKnown RBP14.25□□□□□ -0.13
VARS-220ENST00000461874 PALMDQ9NP74 551 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 MLXQ9UH92 298 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 PRNDQ9UKY0 176 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 F11RQ9Y624 299 aaKnown RBP14.25□□□□□ -0.13
VARS-220ENST00000461874 SELENOKQ9Y6D0 94 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 CEPT1Q9Y6K0 416 aa14.25□□□□□ -0.13
VARS-220ENST00000461874 OR11H12B2RN74 326 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 SMIM18P0DKX4 95 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 C8orf88P0DMB2 117 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 MFAP2P55001 183 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 MZT2AQ6P582 158 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 TBC1D26Q86UD7 250 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 SLC38A6Q8IZM9 456 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 OR5B3Q8NH48 314 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 ISOC1Q96CN7 298 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 WFDC10AQ9H1F0 79 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 FKBP11Q9NYL4 201 aa14.24□□□□□ -0.13
VARS-220ENST00000461874 DYNC2H1Q8NCM8 4307 aaKnown RBP14.24□□□□□ -0.13
VARS-220ENST00000461874 IGHV3-35A0A0C4DH35 117 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 RBMY1BA6NDE4 496 aaKnown RBP14.23□□□□□ -0.13
VARS-220ENST00000461874 RBMY1EA6NEQ0 496 aaKnown RBP14.23□□□□□ -0.13
VARS-220ENST00000461874 DBX1A6NMT0 343 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 FAM25AB3EWG3 89 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 FAM25CB3EWG5 89 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 FAM25GB3EWG6 89 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 TGOLN2O43493 480 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 GABARAPO95166 117 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 IFNA6P05013 189 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 RBMY1DP0C7P1 496 aaKnown RBP14.23□□□□□ -0.13
VARS-220ENST00000461874 MARC2Q969Z3 335 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 TSC22D3Q99576 134 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 ZNF436Q9C0F3 470 aaPredicted RBP14.23□□□□□ -0.13
VARS-220ENST00000461874 TMEM14BQ9NUH8 114 aa14.23□□□□□ -0.13
VARS-220ENST00000461874 M0QYG6 137 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 ZNF182P17025 639 aaPredicted RBP14.22□□□□□ -0.13
VARS-220ENST00000461874 ELLP55199 621 aaPredicted RBP14.22□□□□□ -0.13
VARS-220ENST00000461874 BTNL8Q6UX41 500 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 SLC16A13Q7RTY0 426 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 AP3S1Q92572 193 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 SEC22AQ96IW7 307 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 TMEM56Q96MV1 263 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 HIPK2Q9H2X6 1198 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 SRD5A3Q9H8P0 318 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 MRPL27Q9P0M9 148 aaKnown RBP14.22□□□□□ -0.13
VARS-220ENST00000461874 UFC1Q9Y3C8 167 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 TENM2Q9NT68 2774 aa14.22□□□□□ -0.13
VARS-220ENST00000461874 OR2T8A6NH00 312 aa14.21□□□□□ -0.13
VARS-220ENST00000461874 C15orf61A6NNL5 157 aa14.21□□□□□ -0.13
VARS-220ENST00000461874 IGKV1-39P01597 117 aa14.21□□□□□ -0.13
VARS-220ENST00000461874 IGKV1D-39P04432 117 aa14.21□□□□□ -0.13
VARS-220ENST00000461874 OR1L6Q8NGR2 347 aa14.21□□□□□ -0.13
VARS-220ENST00000461874 SCARB1Q8WTV0 552 aa14.21□□□□□ -0.13
VARS-220ENST00000461874 BSCL2Q96G97 398 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms