RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 IFNA14P01570 189 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 IGKV1-16P04430 117 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 CD79AP11912 226 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 MSNP26038 577 aaKnown RBP1.27□□□□□ -2.21
HDAC6-212ENST00000461608 MAGEA12P43365 314 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 CSN1S1P47710 185 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 CRYBA4P53673 196 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 DEFA1P59665 94 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 TPI1P60174 286 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 SPCS3P61009 180 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 RPL19P84098 196 aaKnown RBP1.27□□□□□ -2.21
HDAC6-212ENST00000461608 KRTAP21-3Q3LHN1 58 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 AKIRIN2Q53H80 203 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 TRIQKQ629K1 86 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 ZNF705AQ6ZN79 300 aaPredicted RBP1.27□□□□□ -2.21
HDAC6-212ENST00000461608 SMIM15Q7Z3B0 74 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 C20orf196Q8IYI0 205 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 DYNAPQ8N1N2 210 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 CLDN22Q8N7P3 220 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 PXT1Q8NFP0 134 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 DCANP1Q8TF63 244 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 SLC35B4Q969S0 331 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 SIGMAR1Q99720 223 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 TRABDQ9H4I3 376 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 CXorf21Q9HAI6 301 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 BATF3Q9NR55 127 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 GLTPQ9NZD2 209 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 PKIGQ9Y2B9 76 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 PRELID3BQ9Y3B1 194 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 ARL5AQ9Y689 179 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 DSCAMO60469 2012 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 CHD5Q8TDI0 1954 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 SMARCA4P51532 1647 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 PEG3Q9GZU2 1588 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 MRC2Q9UBG0 1479 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 ZNF532Q9HCE3 1301 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 MEIKINA0A087WXM9 373 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 A0A0G2JQZ4 141 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 TMEM269A0A1B0GVZ9 245 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 FUOMA2VDF0 154 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 A8MUN3 132 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 EEF1E1-BLOC1S5C9J1V9 151 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 J3QQQ9 107 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 CHP2O43745 196 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 NOS1APO75052 506 aaPredicted RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 GPX1P07203 203 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 BPGMP07738 259 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 MSMBP08118 114 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 NFYAP23511 347 aaPredicted RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 S100A7P31151 101 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 CCR2P41597 374 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 MAP2K4P45985 399 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 RPL5P46777 297 aaKnown RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 RAB13P51153 203 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 TAS2R41P59536 307 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 RPL26P61254 145 aaKnown RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 DEFB103AP81534 67 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 IFITM2Q01629 132 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 KRR1Q13601 381 aaKnown RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 ALX1Q15699 326 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 ARHGAP11BQ3KRB8 267 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 C9orf64Q5T6V5 341 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 SSX8Q7RTT4 187 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 LYG2Q86SG7 212 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 LRRC25Q8N386 305 aaPredicted RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 C10orf126Q8N4M7 172 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 RPP25LQ8N5L8 163 aaKnown RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 TMEM86BQ8N661 226 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 OR8B12Q8NGG6 310 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 OR1L8Q8NGR8 309 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 ACOT12Q8WYK0 555 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 DCUN1D1Q96GG9 259 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 PPP1R2P1Q96PQ5 205 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 NIPSNAP1Q9BPW8 284 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 RPL26L1Q9UNX3 145 aaKnown RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 COQ4Q9Y3A0 265 aa1.26□□□□□ -2.21
HDAC6-212ENST00000461608 FAM32AQ9Y421 112 aaKnown RBP1.26□□□□□ -2.21
HDAC6-212ENST00000461608 CCDC144AA2RUR9 1427 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 IRGMA1A4Y4 181 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 ZNF860A6NHJ4 632 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 H7C2G1 150 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 CST2P09228 141 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 TMEM258P61165 79 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 CCL20P78556 96 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 RUNX1Q01196 453 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 RPL18Q07020 188 aaKnown RBP1.25□□□□□ -2.21
HDAC6-212ENST00000461608 GRK1Q15835 563 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 ACOT6Q3I5F7 207 aaPredicted RBP1.25□□□□□ -2.21
HDAC6-212ENST00000461608 TMEM42Q69YG0 159 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 DHRS4L2Q6PKH6 230 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 TMED4Q7Z7H5 227 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 SMIM20Q8N5G0 67 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 PACRGLQ8N7B6 248 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 KLK6Q92876 244 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 CHST6Q9GZX3 395 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 FAM107BQ9H098 131 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 PCBD2Q9H0N5 130 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 RNASE7Q9H1E1 156 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms