RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 IGLV1-47P01700 117 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 MBP02144 154 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 HOXB4P17483 251 aaPredicted RBP5.49□□□□□ -1.53
MSH2-204ENST00000461394 PRTN3P24158 256 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 ZFP36P26651 326 aaKnown RBP5.49□□□□□ -1.53
MSH2-204ENST00000461394 CD1BP29016 333 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 SUB1P53999 127 aaKnown RBP eCLIP5.49□□□□□ -1.532e-9■■■■■ 27.7
MSH2-204ENST00000461394 DVL1P1P54792 670 aaPredicted RBP5.49□□□□□ -1.53
MSH2-204ENST00000461394 DLK1P80370 383 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 RAB31Q13636 194 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 GUK1Q16774 197 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 AARDQ4LEZ3 155 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 SP5Q6BEB4 398 aaPredicted RBP5.49□□□□□ -1.53
MSH2-204ENST00000461394 FAM122CQ6P4D5 195 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 LCN15Q6UWW0 184 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 IQCF2Q8IXL9 164 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 MMD2Q8IY49 270 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 EIF4E3Q8N5X7 224 aaKnown RBP5.49□□□□□ -1.53
MSH2-204ENST00000461394 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.49□□□□□ -1.53
MSH2-204ENST00000461394 TEX45Q8NA69 505 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 TMEM167AQ8TBQ9 72 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 ABHD5Q8WTS1 349 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 PARD6GQ9BYG4 376 aaPredicted RBP5.49□□□□□ -1.53
MSH2-204ENST00000461394 ZNF430Q9H8G1 570 aaPredicted RBP5.49□□□□□ -1.53
MSH2-204ENST00000461394 SLC39A9Q9NUM3 307 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 TIMM9Q9Y5J7 89 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 KPTNQ9Y664 436 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 ROS1P08922 2347 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 HIVEP3Q5T1R4 2406 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 BTBD17A6NE02 478 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 PMS2P5A8MQ11 134 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 NDUFS8O00217 210 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 SCO1O75880 301 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 CNIH1O95406 144 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 IFNA1P01562 189 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 IGKV1D-33P01593 117 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 IGKV1-33P01594 117 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 IGLV2-23P01705 113 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 REG1AP05451 166 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 CNTFRP26992 372 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 RPL27AP46776 148 aaKnown RBP5.48□□□□□ -1.53
MSH2-204ENST00000461394 CEBPGP53567 150 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 RPL11P62913 178 aaKnown RBP5.48□□□□□ -1.53
MSH2-204ENST00000461394 SERF2P84101 59 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 PSG5Q15238 335 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 MMDQ15546 238 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 SSX2Q16385 188 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 HAGHQ16775 308 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 ACOT6Q3I5F7 207 aaPredicted RBP5.48□□□□□ -1.53
MSH2-204ENST00000461394 C10orf55Q5SWW7 151 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 ZNF787Q6DD87 383 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 CCDC144NLQ6NUI1 221 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 LHFPL4Q7Z7J7 247 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 OR11H6Q8NGC7 330 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 OR10W1Q8NGF6 305 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 OR10G4Q8NGN3 311 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 OR10G9Q8NGN4 311 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 OR10G7Q8NGN6 311 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 SLC35E1Q96K37 410 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 GGACTQ9BVM4 153 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 NPCDR1Q9BY65 106 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 ACTR3CQ9C0K3 210 aaPredicted RBP5.48□□□□□ -1.53
MSH2-204ENST00000461394 FBXL15Q9H469 300 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 VSIRQ9H7M9 311 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 ZMAT4Q9H898 229 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 TPSG1Q9NRR2 321 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 KCNIP2Q9NS61 270 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 CACNA1AO00555 2505 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 SPTA1P02549 2419 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 CHD8Q9HCK8 2581 aa5.48□□□□□ -1.53
MSH2-204ENST00000461394 LAMA5O15230 3695 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 A0A1W2PPI3 338 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 A0A1W2PPV4 95 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 TMEM218A2RU14 115 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 MAP1LC3B2A6NCE7 125 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 RBFOX3A6NFN3 312 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 ODF3BA8MYP8 253 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 FAM157AC9JC47 383 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 LY6LH3BQJ8 138 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 CYB5BO43169 146 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 MPDU1O75352 247 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 VENTXO95231 258 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 MOSP00540 346 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 IL6RP08887 468 aaPredicted RBP5.47□□□□□ -1.53
MSH2-204ENST00000461394 SFTA3P0C7M3 94 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 APELAP0DMC3 54 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 OR13C7P0DN81 318 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 TMEM11P17152 192 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 CD24P25063 80 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 MAS1LP35410 378 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 OPRK1P41145 380 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 PPT1P50897 306 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 FGF8P55075 233 aaPredicted RBP5.47□□□□□ -1.53
MSH2-204ENST00000461394 ATP5IP56385 69 aaPredicted RBP5.47□□□□□ -1.53
MSH2-204ENST00000461394 LMO4P61968 165 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 SRSF3P84103 164 aaKnown RBP5.47□□□□□ -1.53
MSH2-204ENST00000461394 SRSF2Q01130 221 aaKnown RBP5.47□□□□□ -1.53
MSH2-204ENST00000461394 PRSS8Q16651 343 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 VWC2Q2TAL6 325 aa5.47□□□□□ -1.53
MSH2-204ENST00000461394 AKIRIN2Q53H80 203 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms