RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 RTL8BQ17RB0 113 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 TBC1D28Q2M2D7 210 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 DMRTC1Q5HYR2 192 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 LINC01545Q5VT33 79 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 OTPQ5XKR4 325 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 ASPHD2Q6ICH7 369 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 EBLN2Q6P2I7 272 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 TCF23Q7RTU1 214 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 ANKRD37Q7Z713 158 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 HAPLN4Q86UW8 402 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 ATOH7Q8N100 152 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 RAB42Q8N4Z0 105 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 SMRP1Q8NCR6 262 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 OR1F12Q8NHA8 337 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 OR2T6Q8NHC8 308 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 TAF15Q92804 592 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB4-202ENST00000458277 NAT6Q93015 286 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 DUX3Q96PT4 197 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 TRIB1Q96RU8 372 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 RBM24Q9BX46 236 aaKnown RBP4.65□□□□□ -1.67
HMGB4-202ENST00000458277 TMEM160Q9NX00 188 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 MDFICQ9P1T7 246 aa4.65□□□□□ -1.67
HMGB4-202ENST00000458277 NUP205Q92621 2012 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 TRBV20-1A0A075B6N2 111 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 MED19A0JLT2 244 aaPredicted RBP4.64□□□□□ -1.67
HMGB4-202ENST00000458277 MANSC4A6NHS7 340 aaPredicted RBP4.64□□□□□ -1.67
HMGB4-202ENST00000458277 C17orf51A8MQB3 221 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 SHISA9B4DS77 424 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 M0QZQ0 153 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 BMPR1BO00238 502 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 PLPP1O14494 284 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 PAGE4O60829 102 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 MPDU1O75352 247 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 NEURL1O76050 574 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 CST7O76096 145 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 MPIG6BO95866 241 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 SLC25A5P05141 298 aaKnown RBP4.64□□□□□ -1.67
HMGB4-202ENST00000458277 SP1P08047 785 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 HLA-DRB4P13762 266 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 GATA3P23771 443 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 CST5P28325 142 aaPredicted RBP4.64□□□□□ -1.67
HMGB4-202ENST00000458277 CCL23P55773 120 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 UNC119Q13432 240 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 RNPS1Q15287 305 aaKnown RBP4.64□□□□□ -1.67
HMGB4-202ENST00000458277 ZIC1Q15915 447 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 ZNF726P1Q15940 193 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 ETDBQ3ZM63 59 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 TIGITQ495A1 244 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 IBA57Q5T440 356 aaKnown RBP4.64□□□□□ -1.67
HMGB4-202ENST00000458277 TEPPQ6URK8 271 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 C2orf91Q6ZV80 131 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 PRSS41Q7RTY9 318 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.64□□□□□ -1.67
HMGB4-202ENST00000458277 SPEM1Q8N4L4 309 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 ZNF525Q8N782 197 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 TEX45Q8NA69 505 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 OR11H6Q8NGC7 330 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 OR13A1Q8NGR1 328 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 ZNF721Q8TF20 911 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 CT55Q8WUE5 264 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 RNF125Q96EQ8 232 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 PRADC1Q9BSG0 188 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 TMEM147Q9BVK8 224 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 IMUPQ9GZP8 106 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 CDIP1Q9H305 208 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 PPDPFQ9H3Y8 114 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 C20orf141Q9NUB4 165 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 PIGLQ9Y2B2 252 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 KCNE3Q9Y6H6 103 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 R4GN57 208 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 HLA-DRB4X5D2U9 266 aa4.64□□□□□ -1.67
HMGB4-202ENST00000458277 MYO16Q9Y6X6 1858 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 LOC107986453A0A1B0GWG9 222 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 SMIM27A0A1W2PRY6 76 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 C17orf102A2RUQ5 167 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 C9JAW5 83 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.63□□□□□ -1.67
HMGB4-202ENST00000458277 NDUFS4O43181 175 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 TNFSF14O43557 240 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 CHST1O43916 411 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 NDUFB4O95168 129 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 CLDN7O95471 211 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 MT-ATP8P03928 68 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 SCTP09683 121 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 PRTN3P24158 256 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 HOXD9P28356 352 aaPredicted RBP4.63□□□□□ -1.67
HMGB4-202ENST00000458277 CFHR2P36980 270 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 MPV17P39210 176 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 OPRK1P41145 380 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 TMEM50BP56557 158 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 RHOAP61586 193 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 POLR2LP62875 67 aaKnown RBP4.63□□□□□ -1.67
HMGB4-202ENST00000458277 RPL31P62899 125 aaKnown RBP4.63□□□□□ -1.67
HMGB4-202ENST00000458277 MS4A18Q3C1V0 323 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 NMSQ5H8A3 153 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 UTF1Q5T230 341 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 MRPL2Q5T653 305 aaKnown RBP4.63□□□□□ -1.67
HMGB4-202ENST00000458277 TSPO2Q5TGU0 170 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 LCN12Q6JVE5 192 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms