RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 GRPEL2Q8TAA5 225 aa13.08□□□□□ -0.32
CCDC90B-202ENST00000455220 A0A1W2PN81 502 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 IGLC7A0M8Q6 106 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 MSGN1A6NI15 193 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 MED6O75586 246 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 CHRNA7P36544 502 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 RAP2BP61225 183 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 RAB32Q13637 225 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 Q6ZSV7 163 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 PPP1R1CQ8WVI7 109 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 FAM103A1Q9BTL3 118 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 RBKSQ9H477 322 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 PARP11Q9NR21 331 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 ZFP57Q9NU63 452 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 RCL1Q9Y2P8 373 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 K7EPK0 472 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 SYNGR2O43760 224 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 SCGB1D2O95969 90 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 VDAC2P45880 294 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 RIPPLY3P57055 190 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 POLR2GP62487 172 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 CD83Q01151 205 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 SPINK9Q5DT21 86 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 ASPHD1Q5U4P2 390 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 HSD17B13Q7Z5P4 300 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 OR10W1Q8NGF6 305 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 DTD1Q8TEA8 209 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 HINT2Q9BX68 163 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 MAGT1Q9H0U3 335 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 PLEKHA3Q9HB20 300 aa13.07□□□□□ -0.32
CCDC90B-202ENST00000455220 CEBPZOSA8MTT3 80 aa13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 AP4M1O00189 453 aa13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 CRYBA1P05813 215 aa13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 HOXA1P49639 335 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 WT1-ASQ06250 92 aa13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 AKIRIN2Q53H80 203 aa13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 C19orf54Q5BKX5 351 aa13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 ABHD5Q8WTS1 349 aa13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 ST6GAL2Q96JF0 529 aa13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 TMEM68Q96MH6 324 aa13.06□□□□□ -0.32
CCDC90B-202ENST00000455220 NDUFA7O95182 113 aa13.05□□□□□ -0.32
CCDC90B-202ENST00000455220 PSMB6P28072 239 aa13.05□□□□□ -0.32
CCDC90B-202ENST00000455220 S100A10P60903 97 aa13.05□□□□□ -0.32
CCDC90B-202ENST00000455220 LFNGQ8NES3 379 aa13.05□□□□□ -0.32
CCDC90B-202ENST00000455220 C11orf1Q9H5F2 150 aa13.05□□□□□ -0.32
CCDC90B-202ENST00000455220 C16orf95Q9H693 158 aa13.05□□□□□ -0.32
CCDC90B-202ENST00000455220 RANGRFQ9HD47 186 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-202ENST00000455220 LSM5Q9Y4Y9 91 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-202ENST00000455220 WRBO00258 174 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 SSSCA1O60232 199 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 DEDDO75618 318 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 CCNKO75909 580 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 MPC2O95563 127 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 LY86O95711 162 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 AREGP15514 252 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 TMEM95Q3KNT9 176 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 LRRC37A5PQ49AS3 106 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 C11orf87Q6NUJ2 197 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 AKAP14Q86UN6 197 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 MRPL41Q8IXM3 137 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 OR2C3Q8N628 320 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 OR2T35Q8NGX2 323 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 CIB3Q96Q77 187 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 RAB40CQ96S21 281 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 ENY2Q9NPA8 101 aa13.04□□□□□ -0.32
CCDC90B-202ENST00000455220 TRAV14DV4A0A0A6YYC5 116 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 TRAV41A0A0B4J266 112 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 G3V3Q6 166 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 H0YIZ8 118 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 TMEM50AO95807 157 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 CRYGCP07315 174 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 OR13C7P0DN81 318 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 SRSF2Q01130 221 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 TMEM267Q0VDI3 215 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 BSXQ3C1V8 233 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 STPG2Q8N412 459 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 TTC9CQ8N5M4 171 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 OR2T6Q8NHC8 308 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 NOL4LQ96MY1 436 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 HIPK2Q9H2X6 1198 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 SERTAD4Q9NUC0 356 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 NPIPB5A8MRT5 1133 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 G3V318 75 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 PET100P0DJ07 73 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 APELAP0DMC3 54 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 IAPPP10997 89 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 CTRB1P17538 263 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 PAX9P55771 341 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 TAS2R30P59541 319 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 ERHP84090 104 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 CFHR3Q02985 330 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 FGL1Q08830 312 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 ECSCRQ19T08 205 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 Q5BKY6 102 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 CTRB2Q6GPI1 263 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 UNQ5815/PRO19632Q6UWF5 114 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 TCTE3Q8IZS6 198 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 ZNF114Q8NC26 417 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 TAF15Q92804 592 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 SMIM8Q96KF7 97 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms