RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 PGA5P0DJD9 388 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 SPI1P17947 270 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 RAB5AP20339 215 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 TGFBR2P37173 567 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 CEACAM6P40199 344 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 CTRLP40313 264 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 GABRA2P47869 451 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 ZNF138P52744 262 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 ZNF121P58317 390 aaPredicted RBP3□□□□□ -1.93
LINC00393-202ENST00000452852 FAM3AP98173 230 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 PSG5Q15238 335 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 VAMP3Q15836 100 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 COA6Q5JTJ3 125 aaKnown RBP3□□□□□ -1.93
LINC00393-202ENST00000452852 TEX30Q5JUR7 227 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 TEX36Q5VZQ5 186 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 ZNF826PQ6ZT77 177 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 RASSF6Q6ZTQ3 369 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 SYS1Q8N2H4 156 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 LINC00612Q8N6U2 182 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 SUMF2Q8NBJ7 301 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 CHST4Q8NCG5 386 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 OR1M1Q8NGA1 313 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 OR51G1Q8NGK1 321 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 OR4C13Q8NGP0 309 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 OR6Q1Q8NGQ2 317 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 OR10Z1Q8NGY1 313 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 OR6N2Q8NGY6 317 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 THEM6Q8WUY1 208 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 CCL13Q99616 98 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 METTL8Q9H825 291 aaKnown RBP3□□□□□ -1.93
LINC00393-202ENST00000452852 EDA2RQ9HAV5 297 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 SIRT7Q9NRC8 400 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 IL20Q9NYY1 176 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 DNAJC27Q9NZQ0 273 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 KAAG1Q9UBP8 84 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 CLEC2DQ9UHP7 191 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 ZNF391Q9UJN7 358 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 VPREB3Q9UKI3 123 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 SAMHD1Q9Y3Z3 626 aaKnown RBP3□□□□□ -1.93
LINC00393-202ENST00000452852 MPC1Q9Y5U8 109 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 MEGF8Q7Z7M0 2845 aa3□□□□□ -1.93
LINC00393-202ENST00000452852 C5orf63A6NC05 138 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 ZNF850A8MQ14 1090 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 M0R1W7 72 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 GNGT2O14610 69 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 CDIPTO14735 213 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 ANGPTL7O43827 346 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 E2F6O75461 281 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 CD37P11049 281 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 CACNG7P62955 275 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 GNG3P63215 75 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 SLC35B1P78383 322 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 PRDX4Q13162 271 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 KLRD1Q13241 179 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 TNXAQ16473 311 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 POU2AF1Q16633 256 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 KLHL12Q53G59 568 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 OR2T5Q6IEZ7 315 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 PLET1Q6UQ28 207 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 TMPRSS11AQ6ZMR5 421 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 DHFR2Q86XF0 187 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 DEFB107AQ8IZN7 70 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 SELENOHQ8IZQ5 122 aaKnown RBP2.99□□□□□ -1.93
LINC00393-202ENST00000452852 FAM216BQ8N7L0 139 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 LY6G5BQ8NDX9 201 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 OR10G2Q8NGC3 310 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 OR2T29Q8NH02 315 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 LINC01006Q8NI28 216 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 OR51V1Q9H2C8 321 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 C16orf95Q9H693 158 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 CMC2Q9NRP2 79 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 ARMC1Q9NVT9 282 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 ZNRD1Q9P1U0 126 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 ARL2BPQ9Y2Y0 163 aa2.99□□□□□ -1.93
LINC00393-202ENST00000452852 TMEM269A0A1B0GVZ9 245 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 A6NDN8 102 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 FAM183AA6NL82 134 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 OR2AT4A6NND4 320 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 RNASEK-C17orf49H0YIS7 233 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 H3BUX3 64 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 NDUFS6O75380 124 aaKnown RBP2.98□□□□□ -1.93
LINC00393-202ENST00000452852 CST4P01036 141 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 INSP01308 110 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 HMGN1P05114 100 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 OR8U9P0C7N5 309 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 PSKH1P11801 424 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 NQO2P16083 231 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 RAB3BP20337 219 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 TGM4P49221 684 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 UBE2E1P51965 193 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 CAV3P56539 151 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 ESRRGP62508 458 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 GNGT1P63211 74 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 PRB3Q04118 309 aaPredicted RBP2.98□□□□□ -1.93
LINC00393-202ENST00000452852 DAZ2Q13117 558 aaKnown RBP2.98□□□□□ -1.93
LINC00393-202ENST00000452852 LY6EQ16553 131 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 LRRC75BQ2VPJ9 315 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 SMIM21Q3B7S5 101 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 CEACAM21Q3KPI0 293 aa2.98□□□□□ -1.93
LINC00393-202ENST00000452852 WDR86Q86TI4 376 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms