RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 C9orf47Q6ZRZ4 202 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 LCA10Q71F78 164 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 SCXQ7RTU7 201 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 FAM72BQ86X60 149 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 ORMDL3Q8N138 153 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 RNF175Q8N4F7 328 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR5A2Q8NGI9 324 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR4A5Q8NH83 315 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 RPS4Y2Q8TD47 263 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 H1FXQ92522 213 aaKnown RBP3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 NRTNQ99748 197 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 TCEAL2Q9H3H9 227 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 MRPS16Q9Y3D3 137 aaKnown RBP3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 TTC37Q6PGP7 1564 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 REREQ9P2R6 1566 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 TRAV30A0A087WSZ9 112 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 A0A087X002 238 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGHV1OR15-9A0A0B4J2B8 117 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 IRGMA1A4Y4 181 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 GGT3PA6NGU5 568 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 C1orf196B1AJZ1 125 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 GGTLC3B5MD39 225 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 I3L521 148 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF73O43830 326 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 APODP05090 189 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 CD7P09564 240 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 P0DMU3 169 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 FAM231AP0DMU4 169 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 FAM231CP0DMU5 169 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 CRISP2P16562 243 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 CSRP1P21291 193 aaKnown RBP3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST1H2BOP23527 126 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST1H2BBP33778 126 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 CXCL5P42830 114 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 NMUP48645 174 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 UBE2AP49459 152 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST1H2BDP58876 126 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST1H2BCP62807 126 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 BSPH1Q075Z2 132 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 MSMO1Q15800 293 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST2H2BEQ16778 126 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 CCSMST1Q4G0I0 132 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 AMMECR1LQ6DCA0 310 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 GTF2H5Q6ZYL4 71 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 GPHB5Q86YW7 130 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR4S1Q8NGB4 309 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR5C1Q8NGR4 320 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR4K13Q8NH42 304 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST1H2BHQ93079 126 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 MAGOHBQ96A72 148 aaKnown RBP3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 RMI2Q96E14 147 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST1H2BNQ99877 126 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST1H2BMQ99879 126 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 FGFBP2Q9BYJ0 223 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 TUBA4BQ9H853 241 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 CBLN4Q9NTU7 201 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 MOB4Q9Y3A3 225 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 CSAG2Q9Y5P2 127 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 NEO1Q92859 1461 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 TRIP11Q15643 1979 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 ARAP3Q8WWN8 1544 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 NAIPQ13075 1403 aa3.19□□□□□ -1.9
HMGB3P21-201ENST00000452483 GON4LQ3T8J9 2241 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 LOC100130705A0A1B0GUX0 176 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 ARRDC5A6NEK1 342 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 IFITM5A6NNB3 132 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 BBIP1A8MTZ0 92 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 CCL25O15444 150 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR2T1O43869 369 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 PGLYRP1O75594 196 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 CST7O76096 145 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGKV1-39P01597 117 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGKV1D-39P04432 117 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 FABP2P12104 132 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 HOXB6P17509 224 aaKnown RBP3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 LGALS3P17931 250 aaKnown RBP3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 S100A4P26447 101 aaKnown RBP3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 TAS2R45P59539 299 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 RPL22L1Q6P5R6 122 aaKnown RBP3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 TMEM14EPQ6UXP3 125 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 TIFABQ6ZNK6 161 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 SLC25A42Q86VD7 318 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 PACRGLQ8N7B6 248 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 FER1L6-AS1Q8NA97 138 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR8A1Q8NGG7 326 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 C15orf40Q8WUR7 153 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 GTSF1Q8WW33 167 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 DEDD2Q8WXF8 326 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 DOCK7Q96N67 2140 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 MGLLQ99685 303 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 CHAC1Q9BUX1 264 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 TSSK6Q9BXA6 273 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 BOKQ9UMX3 212 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 PHLPP1O60346 1717 aa3.18□□□□□ -1.9
HMGB3P21-201ENST00000452483 SCN5AQ14524 2016 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 CAMSAP2Q08AD1 1489 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms