RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 IGHG4P01861 327 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 SULT1A3P0DMM9 295 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 SULT1A4P0DMN0 295 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 CHRNA7P36544 502 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 KRTAP10-3P60369 221 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 HSPE1P61604 102 aaKnown RBP9.32□□□□□ -0.92
LINC00339-205ENST00000452322 TEX38Q6PEX7 206 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 C10orf99Q6UWK7 81 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 PDCD10Q9BUL8 212 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 NDUFA4L2Q9NRX3 87 aa9.32□□□□□ -0.92
LINC00339-205ENST00000452322 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.32□□□□□ -0.92
LINC00339-205ENST00000452322 STAB1Q9NY15 2570 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 A0A1B0GU03 582 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 HMX3A6NHT5 357 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 SNRPGP15A8MWD9 76 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 ST8SIA3O43173 380 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 SOX15O60248 233 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 FBXO24O75426 580 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 IGLV1-40P01703 118 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 ELANEP08246 267 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 HOXB5P09067 269 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 TRAPPC2P0DI81 140 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 TRAPPC2BP0DI82 140 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 APELAP0DMC3 54 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 SLC25A6P12236 298 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 PRCDQ00LT1 54 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 FOXE3Q13461 319 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 SMCO1Q147U7 214 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 GGNBP1Q5YKI7 109 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 HSD17B13Q7Z5P4 300 aaPredicted RBP9.31□□□□□ -0.92
LINC00339-205ENST00000452322 C12orf45Q8N5I9 185 aaPredicted RBP9.31□□□□□ -0.92
LINC00339-205ENST00000452322 TTC9CQ8N5M4 171 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 C3orf56Q8N813 242 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 OR52E5Q8NH55 327 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 FAM110DQ8TAY7 271 aaPredicted RBP9.31□□□□□ -0.92
LINC00339-205ENST00000452322 CITED1Q99966 193 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 CACFD1Q9UGQ2 172 aa9.31□□□□□ -0.92
LINC00339-205ENST00000452322 TET2Q6N021 2002 aaPredicted RBP9.31□□□□□ -0.92
LINC00339-205ENST00000452322 IGLC7A0M8Q6 106 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 NPIPB5A8MRT5 1133 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 H3BUA1 57 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 ADAP1O75689 374 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 BRI3O95415 125 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 IFNA21P01568 189 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 IFNA17P01571 189 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 CRYGCP07315 174 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 CD28P10747 220 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 PSMB8P28062 276 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 OXA1LQ15070 435 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 PDLIM3Q53GG5 364 aaPredicted RBP9.3□□□□□ -0.92
LINC00339-205ENST00000452322 HINT2Q9BX68 163 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 BOLA1Q9Y3E2 137 aa9.3□□□□□ -0.92
LINC00339-205ENST00000452322 C7orf66A4D0T2 115 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 PITX3O75364 302 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 AREGP15514 252 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 CTRB1P17538 263 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 PSMB6P28072 239 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 SPCS3P61009 180 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 CD83Q01151 205 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 WT1-ASQ06250 92 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 TATDN3Q17R31 274 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 TCTEX1D4Q5JR98 221 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 CXorf66Q5JRM2 361 aaPredicted RBP9.29□□□□□ -0.92
LINC00339-205ENST00000452322 CTRB2Q6GPI1 263 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 SHISA2Q6UWI4 295 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 MRPL41Q8IXM3 137 aaKnown RBP9.29□□□□□ -0.92
LINC00339-205ENST00000452322 C11orf44Q8N8P7 122 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 OR5T1Q8NG75 326 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 OR10W1Q8NGF6 305 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 OR1S1Q8NH92 325 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 SLA2Q9H6Q3 261 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 PLEKHA3Q9HB20 300 aa9.29□□□□□ -0.92
LINC00339-205ENST00000452322 INS-IGF2F8WCM5 200 aa9.28□□□□□ -0.92
LINC00339-205ENST00000452322 OR13C7P0DN81 318 aa9.28□□□□□ -0.92
LINC00339-205ENST00000452322 PF4V1P10720 104 aa9.28□□□□□ -0.92
LINC00339-205ENST00000452322 SRSF4Q08170 494 aaKnown RBP9.28□□□□□ -0.92
LINC00339-205ENST00000452322 TMEM65Q6PI78 240 aa9.28□□□□□ -0.92
LINC00339-205ENST00000452322 UXS1Q8NBZ7 420 aa9.28□□□□□ -0.92
LINC00339-205ENST00000452322 SPATA3Q8NHX4 192 aa9.28□□□□□ -0.92
LINC00339-205ENST00000452322 MYOZ3Q8TDC0 251 aa9.28□□□□□ -0.92
LINC00339-205ENST00000452322 CITED2Q99967 270 aaPredicted RBP9.28□□□□□ -0.92
LINC00339-205ENST00000452322 ZFP57Q9NU63 452 aa9.28□□□□□ -0.92
LINC00339-205ENST00000452322 HSPB7Q9UBY9 170 aa9.28□□□□□ -0.92
LINC00339-205ENST00000452322 TCRBV4S1A1TA0A5B7 111 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 MPTX1A8MV57 137 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 FAM90A26D6RGX4 464 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
LINC00339-205ENST00000452322 REG1AP05451 166 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 HOXA1P49639 335 aaPredicted RBP9.27□□□□□ -0.93
LINC00339-205ENST00000452322 RAB9AP51151 201 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 ERHP84090 104 aaKnown RBP9.27□□□□□ -0.93
LINC00339-205ENST00000452322 TNFRSF9Q07011 255 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 KLK9Q2XQG4 91 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 SPINK9Q5DT21 86 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 OR2C3Q8N628 320 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 KLK15Q9H2R5 256 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 ENY2Q9NPA8 101 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 ZNF355PQ9NSJ1 428 aa9.27□□□□□ -0.93
LINC00339-205ENST00000452322 KLK9Q9UKQ9 250 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms