RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ATP6V0BQ99437 205 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 QTRT1Q9BXR0 403 aaKnown RBP8.11□□□□□ -1.11
USP1-204ENST00000452143 COMMD5Q9GZQ3 224 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 DAZ1Q9NQZ3 744 aaKnown RBP8.11□□□□□ -1.11
USP1-204ENST00000452143 ETV7Q9Y603 341 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 A0A0A6YYH2 397 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 KIR2DL5BA0A0G2JN68 375 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 KIR2DL5BA0A0G2JPC4 375 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 A0A0J9YWU9 116 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 A6NJ64 397 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 TSPAN4O14817 238 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 TGOLN2O43493 480 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 LY6G6CO95867 125 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 PMS2P11Q13670 270 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 IZUMO2Q6UXV1 221 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 LYG2Q86SG7 212 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 HOGA1Q86XE5 327 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 KIR2DL5AQ8N109 375 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 TMEM217Q8N7C4 229 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 GDPD1Q8N9F7 314 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 KIR2DL5BQ8NHK3 375 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 FCGR1BQ92637 280 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 BSCL2Q96G97 398 aaPredicted RBP8.1□□□□□ -1.11
USP1-204ENST00000452143 GPHA2Q96T91 129 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 PLEKHA2Q9HB19 425 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 CCL28Q9NRJ3 127 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 TMEM140Q9NV12 185 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 PGPEP1Q9NXJ5 209 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 COMMD9Q9P000 198 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 SELENOKQ9Y6D0 94 aa8.1□□□□□ -1.11
USP1-204ENST00000452143 ANKRD65E5RJM6 399 aa8.09□□□□□ -1.11
USP1-204ENST00000452143 SULT1C2O00338 296 aa8.09□□□□□ -1.11
USP1-204ENST00000452143 UPK2O00526 184 aa8.09□□□□□ -1.11
USP1-204ENST00000452143 SPRY2O43597 315 aa8.09□□□□□ -1.11
USP1-204ENST00000452143 DEFB135Q30KP9 77 aa8.09□□□□□ -1.11
USP1-204ENST00000452143 LAMTOR1Q6IAA8 161 aa8.09□□□□□ -1.11
USP1-204ENST00000452143 SPSB3Q6PJ21 355 aa8.09□□□□□ -1.11
USP1-204ENST00000452143 CEMP1Q6PRD7 247 aaPredicted RBP8.09□□□□□ -1.11
USP1-204ENST00000452143 SLC5A7Q9GZV3 580 aa8.09□□□□□ -1.11
USP1-204ENST00000452143 RAB26Q9ULW5 256 aa8.09□□□□□ -1.11
USP1-204ENST00000452143 KLK5Q9Y337 293 aaPredicted RBP8.09□□□□□ -1.11
USP1-204ENST00000452143 RRP15Q9Y3B9 282 aaKnown RBP8.09□□□□□ -1.11
USP1-204ENST00000452143 OR4C46A6NHA9 309 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 NDUFA4O00483 81 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 SERPINE2P07093 398 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 PSMB9P28065 219 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 CBX5P45973 191 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 ODF3L2Q3SX64 289 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 GVQW1Q8N7I0 195 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 STPG3Q8N7X2 389 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 DMBX1Q8NFW5 382 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 GIMAP1Q8WWP7 306 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 LSM10Q969L4 123 aaKnown RBP8.08□□□□□ -1.12
USP1-204ENST00000452143 RNF183Q96D59 192 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 SLC25A38Q96DW6 304 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 SSR3Q9UNL2 185 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 HECTD4Q9Y4D8 3996 aa8.08□□□□□ -1.12
USP1-204ENST00000452143 TRAV18A0A075B6X5 111 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 TRAV3A0A0B4J244 114 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 IGHV3-35A0A0C4DH35 117 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 OR2T8A6NH00 312 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 MARCH11A6NNE9 402 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 TMEM127O75204 238 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 S1PR2O95136 353 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 TRAPPC2P0DI81 140 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 TRAPPC2BP0DI82 140 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 OR13C7P0DN81 318 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 PTHLHP12272 177 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 FXYD4P59646 89 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 ERVK-16P61578 105 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 EWSR1Q01844 656 aaKnown RBP eCLIP8.07□□□□□ -1.12
USP1-204ENST00000452143 WT1-ASQ06250 92 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 AADACL3Q5VUY0 350 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 ZNF773Q6PK81 442 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 ZNF818PQ6ZRF7 136 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 TMEM17Q86X19 198 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 SPARTQ8N0X7 666 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 CADM3Q8N126 398 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 OR5AP2Q8NGF4 316 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 OR10W1Q8NGF6 305 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 OR51H1Q8NH63 302 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 C21orf62Q9NYP8 219 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 UBQLN2Q9UHD9 624 aa8.07□□□□□ -1.12
USP1-204ENST00000452143 F11RQ9Y624 299 aaKnown RBP8.07□□□□□ -1.12
USP1-204ENST00000452143 DNAH10Q8IVF4 4471 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 C15orf62A8K5M9 175 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 K7EMT4 169 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 SDC2P34741 201 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 HERV-K104P61576 105 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 OR1L8Q8NGR8 309 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 GALNT14Q96FL9 552 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 C6orf62Q9GZU0 229 aaPredicted RBP8.06□□□□□ -1.12
USP1-204ENST00000452143 AUNIPQ9H7T9 357 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 DIABLOQ9NR28 239 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 NDUFA4L2Q9NRX3 87 aa8.06□□□□□ -1.12
USP1-204ENST00000452143 TEX50A0A1B0GTY4 177 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 RLN1P04808 185 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 F2RP25116 425 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 GNRHRP30968 328 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 MXD1Q05195 221 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms