RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MALRD1Q5VYJ5 2156 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 F8W036 122 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 RRHO14718 337 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 AGPAT2O15120 278 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 IGHV2-5P01817 119 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 MAS1LP35410 378 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 ARF6P62330 175 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 DIAPH2-AS1Q14236 149 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 MOB3BQ86TA1 216 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 SVBPQ8N300 66 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 Q8N7P7 452 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 NPCDR1Q9BY65 106 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 EIF5A2Q9GZV4 153 aaKnown RBP8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 NARFLQ9H6Q4 476 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 UNKLQ9H9P5 680 aaKnown RBP8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 KIAA1456Q9P272 454 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 DPM3Q9P2X0 92 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 SPTBN1Q01082 2364 aaKnown RBP8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 OOSP1A8MZH6 123 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 LY6LH3BQJ8 138 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 NDUFS7O75251 213 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 IGLV2-23P01705 113 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 MDKP21741 143 aaPredicted RBP8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 SUB1P53999 127 aaKnown RBP eCLIP8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 AKR1C1Q04828 323 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 RAB31Q13636 194 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 C2orf83Q53S99 150 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 C10orf91Q5T1B1 145 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 TPTE2P1Q5T6R2 138 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 MMD2Q8IY49 270 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 SFT2D1Q8WV19 159 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 BBC3Q96PG8 261 aaPredicted RBP8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 CCL19Q99731 98 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 NPVFQ9HCQ7 196 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 NDUFA4L2Q9NRX3 87 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 RPRMQ9NS64 109 aa8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 CARHSP1Q9Y2V2 147 aaKnown RBP8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
VIPAS39-203ENST00000448935 IGSF10Q6WRI0 2623 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 SMCO3A2RU48 225 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 PRSS46E5RG02 174 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 NDUFS8O00217 210 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 FOXH1O75593 365 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 ACTL6BO94805 426 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 CA2P00918 260 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 M6PRP20645 277 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 DEFA5Q01523 94 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 ACOT6Q3I5F7 207 aaPredicted RBP8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 CCDC144NLQ6NUI1 221 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 SPSB3Q6PJ21 355 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 SHISA2Q6UWI4 295 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 Q6ZS46 218 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 ZNF843Q8N446 348 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 IGFBPL1Q8WX77 278 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 TMEM231Q9H6L2 316 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 FAM96BQ9Y3D0 163 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 RFNGQ9Y644 331 aa8.53□□□□□ -1.04
VIPAS39-203ENST00000448935 RBFOX3A6NFN3 312 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 ODF3BA8MYP8 253 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 LCE2BO14633 110 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 CYB5BO43169 146 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 SLC25A17O43808 307 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 TSPAN9O75954 239 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 SNAPINO95295 136 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 IFNA1P01562 189 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 SFTA3P0C7M3 94 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 OPRK1P41145 380 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 ELLP55199 621 aaPredicted RBP8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 SRSF3P84103 164 aaKnown RBP8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 BSXQ3C1V8 233 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 FFAR4Q5NUL3 377 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 MINOS1Q5TGZ0 78 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 PIMREGQ9BSJ6 248 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 ACTR3CQ9C0K3 210 aaPredicted RBP8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 ZNF430Q9H8G1 570 aaPredicted RBP8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 SIRT7Q9NRC8 400 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 SLC39A9Q9NUM3 307 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 MINOS1-NBL1R4GNA1 71 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 KALRNO60229 2985 aa8.52□□□□□ -1.05
VIPAS39-203ENST00000448935 IGHV2-70DA0A0C4DH43 119 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 CTXND1A0A1B0GTU2 59 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 A0A1W2PPI3 338 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 IGHV4-39P01824 125 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 PRB1P04280 392 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 LGALS4P56470 323 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 PMS2P11Q13670 270 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 SP5Q6BEB4 398 aaPredicted RBP8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 ZNF787Q6DD87 383 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 TEPPQ6URK8 271 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 TREML4Q6UXN2 200 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 VMO1Q7Z5L0 202 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 OR10G4Q8NGN3 311 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 OR10G9Q8NGN4 311 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 OR10G7Q8NGN6 311 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 CLDND2Q8NHS1 167 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 TMEM170AQ8WVE7 144 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 CACNG8Q8WXS5 425 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 BPESC1Q9GZL8 116 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 IGHV3-72A0A0B4J1Y9 119 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms