RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 FAM162AQ96A26 154 aa2.13□□□□□ -2.07
PMS1-215ENST00000447232 GNPNAT1Q96EK6 184 aaPredicted RBP2.13□□□□□ -2.07
PMS1-215ENST00000447232 TMEM109Q9BVC6 243 aa2.13□□□□□ -2.07
PMS1-215ENST00000447232 ISG20L2Q9H9L3 353 aaKnown RBP2.13□□□□□ -2.07
PMS1-215ENST00000447232 DNAJC4Q9NNZ3 241 aa2.13□□□□□ -2.07
PMS1-215ENST00000447232 CLN6Q9NWW5 311 aa2.13□□□□□ -2.07
PMS1-215ENST00000447232 MSRB1Q9NZV6 116 aa2.13□□□□□ -2.07
PMS1-215ENST00000447232 DPPA5A6NC42 116 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 H3BNG1 76 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 M0R1X1 148 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 SULT1C4O75897 302 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 APOHP02749 345 aaPredicted RBP2.12□□□□□ -2.07
PMS1-215ENST00000447232 KRT8P05787 483 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 GLAP06280 429 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 CTSGP08311 255 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 DEFB130BP0DP73 79 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 DEFB130AP0DP74 79 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 PSG1P11464 419 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 RRN3P1Q2M238 152 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 SPARTQ8N0X7 666 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 PARP16Q8N5Y8 322 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.12□□□□□ -2.07
PMS1-215ENST00000447232 IL1F10Q8WWZ1 152 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 CPNE2Q96FN4 548 aaPredicted RBP2.12□□□□□ -2.07
PMS1-215ENST00000447232 NSL1Q96IY1 281 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 UQCC2Q9BRT2 126 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 MGAT4CQ9UBM8 478 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 RABAC1Q9UI14 185 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 AP3M1Q9Y2T2 418 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 TRAV26-1A0A087WT03 109 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 A0A1W2PQL4 384 aaPredicted RBP2.12□□□□□ -2.07
PMS1-215ENST00000447232 PLAC8L1A1L4L8 177 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 METTL15A6NJ78 407 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 ZNF670-ZNF695F2Z2N8 137 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 K7EP13 123 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 NME4O00746 187 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 ST8SIA3O43173 380 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 TOMM40O96008 361 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 NAPSAO96009 420 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 RRASP10301 218 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 DEFA4P12838 97 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 SERPINA2P20848 420 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 RPL27AP46776 148 aaKnown RBP2.12□□□□□ -2.07
PMS1-215ENST00000447232 CCR9P51686 369 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 TIRAPP58753 221 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 YIF1BQ5BJH7 314 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 SIGIRRQ6IA17 410 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 CGB2Q6NT52 195 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 ZNF709Q8N972 641 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 OR2G2Q8NGZ5 317 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 C5orf30Q96GV9 206 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 NIPSNAP1Q9BPW8 284 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 FAM192AQ9GZU8 254 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 METTL9Q9H1A3 318 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 REEP1Q9H902 201 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 PEX16Q9Y5Y5 336 aa2.12□□□□□ -2.07
PMS1-215ENST00000447232 A0A0J9YXV3 536 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 BBIP1A8MTZ0 92 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 TNFRSF11BO00300 401 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 CCNB2O95067 398 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 NXPH4O95158 308 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 HMGN1P05114 100 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 HLA-DRB4P13762 266 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 GTF2F2P13984 249 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 M6PRP20645 277 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 ATP6V1B2P21281 511 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 HOXA1P49639 335 aaPredicted RBP2.11□□□□□ -2.07
PMS1-215ENST00000447232 CDK5Q00535 292 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 IFFO1Q0D2I5 559 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 GINS1Q14691 196 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 RTL8BQ17RB0 113 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 ZNF880Q6PDB4 577 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 ANKRD42Q8N9B4 389 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 OR51A2Q8NGJ7 313 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 OR5D14Q8NGL3 314 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 OR13C3Q8NGS6 347 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 GGHQ92820 318 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 PYURFQ96I23 114 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 GID8Q9NWU2 228 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 THYN1Q9P016 225 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 ABRACLQ9P1F3 81 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 OR1A1Q9P1Q5 309 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 HLA-DRB4X5D2U9 266 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 A0A096LPF7 62 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 H3BN98 237 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 ZNF701M0R085 212 aaPredicted RBP2.11□□□□□ -2.07
PMS1-215ENST00000447232 ZNF780AO75290 641 aaPredicted RBP2.11□□□□□ -2.07
PMS1-215ENST00000447232 CRYZL1O95825 349 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 FABP3P05413 133 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 CEACAM6P40199 344 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 PSMD7P51665 324 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 RELQ04864 619 aaPredicted RBP2.11□□□□□ -2.07
PMS1-215ENST00000447232 CBX3Q13185 183 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 FCN2Q15485 313 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 LINC01620Q4KN68 170 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 PSMG4Q5JS54 123 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 ARPINQ7Z6K5 226 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 ARHGAP24Q8N264 748 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 LRTM2Q8N967 370 aa2.11□□□□□ -2.07
PMS1-215ENST00000447232 STXBP6Q8NFX7 210 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms