RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 LSM4Q9Y4Z0 139 aaKnown RBP14.12□□□□□ -0.15
SMC6-206ENST00000446852 A0A1W2PPH5 198 aa14.11□□□□□ -0.15
SMC6-206ENST00000446852 M0R036 132 aa14.11□□□□□ -0.15
SMC6-206ENST00000446852 RBP4P02753 201 aa14.11□□□□□ -0.15
SMC6-206ENST00000446852 SNRNP70P08621 437 aaKnown RBP14.11□□□□□ -0.15
SMC6-206ENST00000446852 AGAP20933 346 aa14.11□□□□□ -0.15
SMC6-206ENST00000446852 RAB13P51153 203 aa14.11□□□□□ -0.15
SMC6-206ENST00000446852 TMEM167AQ8TBQ9 72 aa14.11□□□□□ -0.15
SMC6-206ENST00000446852 GGTLC1Q9BX51 225 aa14.11□□□□□ -0.15
SMC6-206ENST00000446852 TMPRSS5Q9H3S3 457 aa14.11□□□□□ -0.15
SMC6-206ENST00000446852 C7orf77A4D0Y5 90 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 USF1P22415 310 aaPredicted RBP14.1□□□□□ -0.15
SMC6-206ENST00000446852 COX7A1P24310 79 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 CDKN1AP38936 164 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 RAB24Q969Q5 203 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 RPS10P5Q9NQ39 176 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 NDUFA4L2Q9NRX3 87 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 PUS1Q9Y606 427 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMC6-206ENST00000446852 YIF1AO95070 293 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 MC5RP33032 325 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 PRRX1P54821 245 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 AKAP6Q13023 2319 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 BSXQ3C1V8 233 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 ACTR3CQ9C0K3 210 aaPredicted RBP14.1□□□□□ -0.15
SMC6-206ENST00000446852 COMMD5Q9GZQ3 224 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 CHODLQ9H9P2 273 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 NPVFQ9HCQ7 196 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 TPSG1Q9NRR2 321 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 ONECUT1Q9UBC0 465 aa14.1□□□□□ -0.15
SMC6-206ENST00000446852 USP24Q9UPU5 2620 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 BUB1B-PAK6H3BSN5 160 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 NDUFS7O75251 213 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 OPRK1P41145 380 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 BEND2Q8NDZ0 799 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 OR4P4Q8NGL7 312 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 ZNF430Q9H8G1 570 aaPredicted RBP14.09□□□□□ -0.15
SMC6-206ENST00000446852 CGB1A6NKQ9 187 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 SLC25A17O43808 307 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 LIPFP07098 398 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 ACOT6Q3I5F7 207 aaPredicted RBP14.09□□□□□ -0.15
SMC6-206ENST00000446852 C10orf55Q5SWW7 151 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 VSTM2AQ8TAG5 236 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 UNKLQ9H9P5 680 aaKnown RBP14.09□□□□□ -0.15
SMC6-206ENST00000446852 UBTD1Q9HAC8 227 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 PATZ1Q9HBE1 687 aaKnown RBP14.09□□□□□ -0.15
SMC6-206ENST00000446852 COL12A1Q99715 3063 aa14.09□□□□□ -0.15
SMC6-206ENST00000446852 H3BQ15 152 aa14.08□□□□□ -0.15
SMC6-206ENST00000446852 RNASE2P10153 161 aaKnown RBP14.08□□□□□ -0.15
SMC6-206ENST00000446852 PMS2P11Q13670 270 aa14.08□□□□□ -0.15
SMC6-206ENST00000446852 MRGPRG-AS1Q2M3A8 158 aa14.08□□□□□ -0.15
SMC6-206ENST00000446852 MIC13Q5XKP0 118 aa14.08□□□□□ -0.15
SMC6-206ENST00000446852 OR1L8Q8NGR8 309 aa14.08□□□□□ -0.15
SMC6-206ENST00000446852 OR4A5Q8NH83 315 aa14.08□□□□□ -0.15
SMC6-206ENST00000446852 C17orf50Q8WW18 174 aa14.08□□□□□ -0.15
SMC6-206ENST00000446852 FAM122AQ96E09 287 aa14.08□□□□□ -0.15
SMC6-206ENST00000446852 PXMP4Q9Y6I8 212 aa14.08□□□□□ -0.15
SMC6-206ENST00000446852 ENSAO43768 121 aaKnown RBP14.08□□□□□ -0.16
SMC6-206ENST00000446852 CDC34P49427 236 aaPredicted RBP14.08□□□□□ -0.16
SMC6-206ENST00000446852 C2orf83Q53S99 150 aa14.08□□□□□ -0.16
SMC6-206ENST00000446852 MOB3BQ86TA1 216 aa14.08□□□□□ -0.16
SMC6-206ENST00000446852 VAX2Q9UIW0 290 aa14.08□□□□□ -0.16
SMC6-206ENST00000446852 IGHV1-3A0A0C4DH29 117 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 SEC14L6B5MCN3 397 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 CYB5BO43169 146 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 FAM90A2PQ658T7 463 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 TEPPQ6URK8 271 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 PNKDQ8N490 385 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 SSMEM1Q8WWF3 244 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 SMCO4Q9NRQ5 59 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 SPTAN1Q13813 2472 aaKnown RBP14.07□□□□□ -0.16
SMC6-206ENST00000446852 IGFBP2P18065 325 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 GATAD1Q8WUU5 269 aa14.07□□□□□ -0.16
SMC6-206ENST00000446852 SSBP3Q9BWW4 388 aaPredicted RBP14.07□□□□□ -0.16
SMC6-206ENST00000446852 IFNA1P01562 189 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 CNTFRP26992 372 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 ARF6P62330 175 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 WT1-ASQ06250 92 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 RHEBQ15382 184 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 LDLRAD2Q5SZI1 272 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 hCG_1809904A0A1W2PP81 198 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 A0A1W2PPE2 198 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 A0A1W2PR64 198 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 A0A1W2PRV1 198 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 A6NNC1 897 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 VMA21Q3ZAQ7 101 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 SIRT7Q9NRC8 400 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 INSIG2Q9Y5U4 225 aa14.06□□□□□ -0.16
SMC6-206ENST00000446852 FNDC10F2Z333 226 aa14.05□□□□□ -0.16
SMC6-206ENST00000446852 INS-IGF2F8WCM5 200 aa14.05□□□□□ -0.16
SMC6-206ENST00000446852 LY6LH3BQJ8 138 aa14.05□□□□□ -0.16
SMC6-206ENST00000446852 SOX15O60248 233 aa14.05□□□□□ -0.16
SMC6-206ENST00000446852 LGALS7P47929 136 aa14.05□□□□□ -0.16
SMC6-206ENST00000446852 CD81P60033 236 aa14.05□□□□□ -0.16
SMC6-206ENST00000446852 P2RX4Q99571 388 aa14.05□□□□□ -0.16
SMC6-206ENST00000446852 COLCA2A8K830 154 aa14.05□□□□□ -0.16
SMC6-206ENST00000446852 ATP5IP56385 69 aaPredicted RBP14.05□□□□□ -0.16
SMC6-206ENST00000446852 MEF2BQ02080 365 aaPredicted RBP14.05□□□□□ -0.16
SMC6-206ENST00000446852 MLANAQ16655 118 aa14.05□□□□□ -0.16
SMC6-206ENST00000446852 RBMS3Q6XE24 437 aaKnown RBP14.05□□□□□ -0.16
SMC6-206ENST00000446852 IQCF2Q8IXL9 164 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms