RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TEX22C9J3V5 150 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 G3V318 75 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 NDUFA7O95182 113 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 SCGB1D2O95969 90 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 CYCSP99999 105 aaKnown RBP13.71□□□□□ -0.21
SGCE-206ENST00000445866 PRCDQ00LT1 54 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 ID3Q02535 119 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 UNQ5815/PRO19632Q6UWF5 114 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 OR4D5Q8NGN0 318 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 C16orf95Q9H693 158 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 ENY2Q9NPA8 101 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 HSPB7Q9UBY9 170 aa13.71□□□□□ -0.21
SGCE-206ENST00000445866 TRAV41A0A0B4J266 112 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 OR13C7P0DN81 318 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 ECSCRQ19T08 205 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 AKIRIN2Q53H80 203 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 OR5T1Q8NG75 326 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 OR4F5Q8NH21 305 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 LINC01006Q8NI28 216 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 RBKSQ9H477 322 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 PLEKHA3Q9HB20 300 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 SERTAD4Q9NUC0 356 aa13.7□□□□□ -0.22
SGCE-206ENST00000445866 A0A1W2PN81 502 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 FAM90A26D6RGX4 464 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 MBPP02686 304 aaPredicted RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 HKR1P10072 659 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 CHRNA7P36544 502 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 HOXA1P49639 335 aaPredicted RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 CENPVQ7Z7K6 275 aaPredicted RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 STPG2Q8N412 459 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 WDR89Q96FK6 387 aaPredicted RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 TMEM68Q96MH6 324 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 NMES1Q9C002 83 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 HEYLQ9NQ87 328 aaPredicted RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 WRBO00258 174 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 MED6O75586 246 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 AREGP15514 252 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 POLR2GP62487 172 aaKnown RBP eCLIP13.69□□□□□ -0.22
SGCE-206ENST00000445866 ERHP84090 104 aaKnown RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 PDLIM3Q53GG5 364 aaPredicted RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 MRPL41Q8IXM3 137 aaKnown RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 SRSF8Q9BRL6 282 aaKnown RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 GON7Q9BXV9 100 aa13.69□□□□□ -0.22
SGCE-206ENST00000445866 ZNF436Q9C0F3 470 aaPredicted RBP13.69□□□□□ -0.22
SGCE-206ENST00000445866 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
SGCE-206ENST00000445866 SYNGR2O43760 224 aa13.68□□□□□ -0.22
SGCE-206ENST00000445866 REG1AP05451 166 aa13.68□□□□□ -0.22
SGCE-206ENST00000445866 WT1-ASQ06250 92 aa13.68□□□□□ -0.22
SGCE-206ENST00000445866 IL15RAQ13261 267 aa13.68□□□□□ -0.22
SGCE-206ENST00000445866 ASPHD1Q5U4P2 390 aa13.68□□□□□ -0.22
SGCE-206ENST00000445866 HSD17B13Q7Z5P4 300 aaPredicted RBP13.68□□□□□ -0.22
SGCE-206ENST00000445866 ZNF329Q86UD4 541 aa13.68□□□□□ -0.22
SGCE-206ENST00000445866 DTD1Q8TEA8 209 aa13.68□□□□□ -0.22
SGCE-206ENST00000445866 HIPK2Q9H2X6 1198 aa13.68□□□□□ -0.22
SGCE-206ENST00000445866 IAPPP10997 89 aa13.67□□□□□ -0.22
SGCE-206ENST00000445866 CRIP2P52943 208 aaPredicted RBP13.67□□□□□ -0.22
SGCE-206ENST00000445866 S100A10P60903 97 aa13.67□□□□□ -0.22
SGCE-206ENST00000445866 TTC9CQ8N5M4 171 aa13.67□□□□□ -0.22
SGCE-206ENST00000445866 CHAC2Q8WUX2 184 aa13.67□□□□□ -0.22
SGCE-206ENST00000445866 LSM5Q9Y4Y9 91 aaKnown RBP13.67□□□□□ -0.22
SGCE-206ENST00000445866 CLPSL1A2RUU4 121 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 DEFA4P12838 97 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 MDKP21741 143 aaPredicted RBP13.66□□□□□ -0.22
SGCE-206ENST00000445866 PSMB6P28072 239 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 SNCAP37840 140 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 SRSF4Q08170 494 aaKnown RBP13.66□□□□□ -0.22
SGCE-206ENST00000445866 RAB32Q13637 225 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 LRRC37A5PQ49AS3 106 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 ZNF355PQ9NSJ1 428 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 RNF114Q9Y508 228 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 HAX1O00165 279 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 SSSCA1O60232 199 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 RLN2P04090 185 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 SLC35B1P78383 322 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 CD83Q01151 205 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 OR2C3Q8N628 320 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 PPP1R1CQ8WVI7 109 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 WNT10AQ9GZT5 417 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 ZFP57Q9NU63 452 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 ZNF580Q9UK33 172 aa13.66□□□□□ -0.22
SGCE-206ENST00000445866 PSMB11A5LHX3 300 aa13.65□□□□□ -0.22
SGCE-206ENST00000445866 K7EPK0 472 aa13.65□□□□□ -0.22
SGCE-206ENST00000445866 GIPP09681 153 aaPredicted RBP13.65□□□□□ -0.22
SGCE-206ENST00000445866 PPIFP30405 207 aaKnown RBP13.65□□□□□ -0.22
SGCE-206ENST00000445866 BCAP31P51572 246 aa13.65□□□□□ -0.22
SGCE-206ENST00000445866 C19orf54Q5BKX5 351 aa13.65□□□□□ -0.22
SGCE-206ENST00000445866 C11orf87Q6NUJ2 197 aa13.65□□□□□ -0.22
SGCE-206ENST00000445866 C19orf35Q6ZS72 473 aa13.65□□□□□ -0.22
SGCE-206ENST00000445866 CIB3Q96Q77 187 aaPredicted RBP13.65□□□□□ -0.22
SGCE-206ENST00000445866 NPIPB5A8MRT5 1133 aa13.64□□□□□ -0.23
SGCE-206ENST00000445866 INS-IGF2F8WCM5 200 aa13.64□□□□□ -0.23
SGCE-206ENST00000445866 IFNA10P01566 189 aa13.64□□□□□ -0.23
SGCE-206ENST00000445866 CRYGCP07315 174 aa13.64□□□□□ -0.23
SGCE-206ENST00000445866 CTRB1P17538 263 aa13.64□□□□□ -0.23
SGCE-206ENST00000445866 RAP2BP61225 183 aa13.64□□□□□ -0.23
SGCE-206ENST00000445866 FOXL1Q12952 345 aa13.64□□□□□ -0.23
SGCE-206ENST00000445866 KRTAP24-1Q3LI83 254 aa13.64□□□□□ -0.23
SGCE-206ENST00000445866 CTRB2Q6GPI1 263 aa13.64□□□□□ -0.23
SGCE-206ENST00000445866 FAM110DQ8TAY7 271 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms