RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 COX7A1P24310 79 aa12.68□□□□□ -0.38
SNX13-204ENST00000444712 CEACAM3P40198 252 aa12.68□□□□□ -0.38
SNX13-204ENST00000444712 SUB1P53999 127 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNX13-204ENST00000444712 MMD2Q8IY49 270 aa12.68□□□□□ -0.38
SNX13-204ENST00000444712 OR11H6Q8NGC7 330 aa12.68□□□□□ -0.38
SNX13-204ENST00000444712 OR4P4Q8NGL7 312 aa12.68□□□□□ -0.38
SNX13-204ENST00000444712 NBASA2RRP1 2371 aa12.68□□□□□ -0.38
SNX13-204ENST00000444712 MALRD1Q5VYJ5 2156 aa12.68□□□□□ -0.38
SNX13-204ENST00000444712 ADGRG4Q8IZF6 3080 aa12.68□□□□□ -0.38
SNX13-204ENST00000444712 SRP19P09132 144 aaKnown RBP12.67□□□□□ -0.38
SNX13-204ENST00000444712 MAS1LP35410 378 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 NPBWR1P48145 328 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 PNKDQ8N490 385 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
SNX13-204ENST00000444712 IGKV1D-33P01593 117 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 IGKV1-33P01594 117 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 OR13C7P0DN81 318 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 MYOD1P15172 320 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
SNX13-204ENST00000444712 MOB3BQ86TA1 216 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 RXFP4Q8TDU9 374 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 GGTLC1Q9BX51 225 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 MANBALQ9NQG1 85 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 VAX2Q9UIW0 290 aa12.67□□□□□ -0.38
SNX13-204ENST00000444712 SEC14L6B5MCN3 397 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 LY6LH3BQJ8 138 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 TSPAN4O14817 238 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 SLC25A17O43808 307 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 RNASE2P10153 161 aaKnown RBP12.66□□□□□ -0.38
SNX13-204ENST00000444712 PRTN3P24158 256 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 HTR1DP28221 377 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 HNF4GQ14541 408 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 ARSJQ5FYB0 599 aaPredicted RBP12.66□□□□□ -0.38
SNX13-204ENST00000444712 FAM122CQ6P4D5 195 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 SSX7Q7RTT5 188 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 Q8N7P7 452 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 MGST2Q99735 147 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 ZNF430Q9H8G1 570 aaPredicted RBP12.66□□□□□ -0.38
SNX13-204ENST00000444712 SLC25A22Q9H936 323 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 FAM74A7A6NL05 159 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 ZFP92A6NM28 416 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 OPN1MWP04001 364 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 OPN1MW2P0DN77 364 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 OPN1MW3P0DN78 364 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
SNX13-204ENST00000444712 RHEBQ15382 184 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 TMEM249Q2WGJ8 235 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 FAM74A3Q4VXF1 159 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 CACNG8Q8WXS5 425 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 PXMP4Q9Y6I8 212 aa12.66□□□□□ -0.38
SNX13-204ENST00000444712 A0A1W2PPV4 95 aa12.65□□□□□ -0.38
SNX13-204ENST00000444712 ACTL6BO94805 426 aa12.65□□□□□ -0.38
SNX13-204ENST00000444712 GPX4P36969 197 aaPredicted RBP12.65□□□□□ -0.38
SNX13-204ENST00000444712 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
SNX13-204ENST00000444712 ARF6P62330 175 aa12.65□□□□□ -0.38
SNX13-204ENST00000444712 TPTE2P1Q5T6R2 138 aa12.65□□□□□ -0.38
SNX13-204ENST00000444712 TMEM144Q7Z5S9 345 aa12.65□□□□□ -0.38
SNX13-204ENST00000444712 RNASEH2CQ8TDP1 164 aaKnown RBP12.65□□□□□ -0.38
SNX13-204ENST00000444712 RAB24Q969Q5 203 aa12.65□□□□□ -0.38
SNX13-204ENST00000444712 DPM3Q9P2X0 92 aa12.65□□□□□ -0.38
SNX13-204ENST00000444712 PKD1L2Q7Z442 2459 aa12.65□□□□□ -0.38
SNX13-204ENST00000444712 ZZEF1O43149 2961 aa12.64□□□□□ -0.39
SNX13-204ENST00000444712 M0R036 132 aa12.64□□□□□ -0.39
SNX13-204ENST00000444712 OVOL3O00110 214 aa12.64□□□□□ -0.39
SNX13-204ENST00000444712 IGHV2-5P01817 119 aa12.64□□□□□ -0.39
SNX13-204ENST00000444712 PSMB3P49720 205 aa12.64□□□□□ -0.39
SNX13-204ENST00000444712 NUPL2O15504 423 aaKnown RBP12.64□□□□□ -0.39
SNX13-204ENST00000444712 CD69Q07108 199 aa12.64□□□□□ -0.39
SNX13-204ENST00000444712 SMCO4Q9NRQ5 59 aa12.64□□□□□ -0.39
SNX13-204ENST00000444712 IGHV3-72A0A0B4J1Y9 119 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 ODF3BA8MYP8 253 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 OOSP1A8MZH6 123 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 CRYGBP07316 175 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 B2MP61769 119 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 PSG5Q15238 335 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 PRSS8Q16651 343 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 AWAT1Q58HT5 328 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 CYB561D1Q8N8Q1 229 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 OR10W1Q8NGF6 305 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 SLC35E1Q96K37 410 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 NIPSNAP3BQ9BS92 247 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 SIRT7Q9NRC8 400 aa12.63□□□□□ -0.39
SNX13-204ENST00000444712 TPRP12270 2363 aaKnown RBP12.62□□□□□ -0.39
SNX13-204ENST00000444712 ITPR1Q14643 2758 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 A0A1W2PPI3 338 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 TSPAN9O75954 239 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 RPL27AP46776 148 aaKnown RBP12.62□□□□□ -0.39
SNX13-204ENST00000444712 CCDC144NLQ6NUI1 221 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 SLC35E3Q7Z769 313 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 RPS10P5Q9NQ39 176 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 SIGLEC9Q9Y336 463 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 TNCP24821 2201 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 SPTBN1Q01082 2364 aaKnown RBP12.62□□□□□ -0.39
SNX13-204ENST00000444712 DLX1P56177 255 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 MEF2BQ02080 365 aaPredicted RBP12.62□□□□□ -0.39
SNX13-204ENST00000444712 MIC13Q5XKP0 118 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 TMEM88Q6PEY1 159 aa12.62□□□□□ -0.39
SNX13-204ENST00000444712 KLF2Q9Y5W3 355 aaPredicted RBP12.62□□□□□ -0.39
SNX13-204ENST00000444712 KALRNO60229 2985 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 C7orf77A4D0Y5 90 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms