RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 HMX3A6NHT5 357 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 NPIPB5A8MRT5 1133 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 SFT2D2O95562 160 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 HLA-AP01891 365 aaKnown RBP11.01□□□□□ -0.65
SSBP3-208ENST00000444533 TCRBP04435 133 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 HIST1H1BP16401 226 aaKnown RBP11.01□□□□□ -0.65
SSBP3-208ENST00000444533 PRR31Q5SQ13 230 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 LCNL1Q6ZST4 164 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 SLC35G3Q8N808 338 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 DPF1Q92782 380 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 USMG5Q96IX5 58 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 C20orf85Q9H1P6 137 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 PLEKHA3Q9HB20 300 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-208ENST00000444533 SHPKQ9UHJ6 478 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 PLXNB1O43157 2135 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 FAM223BA6NKX1 122 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 TEX22C9J3V5 150 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 BRI3O95415 125 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 IGKV1-5P01602 117 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 OR13C7P0DN81 318 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 PSMB6P28072 239 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 HSPE1P61604 102 aaKnown RBP11□□□□□ -0.65
SSBP3-208ENST00000444533 ERHP84090 104 aaKnown RBP11□□□□□ -0.65
SSBP3-208ENST00000444533 PPP1R1AQ13522 171 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 FAM209BQ5JX69 171 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 HIST2H2BDQ6DRA6 164 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 TREML4Q6UXN2 200 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 ZNF429Q86V71 674 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 FAM223AQ8IWN6 122 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 ZNF491Q8N8L2 437 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 OR1L6Q8NGR2 347 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 KLK15Q9H2R5 256 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 NUDT15Q9NV35 164 aa11□□□□□ -0.65
SSBP3-208ENST00000444533 SOX15O60248 233 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 TSPAN15O95858 294 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 IFNA21P01568 189 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 OR4E1P0C645 316 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 SULT1A3P0DMM9 295 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 SULT1A4P0DMN0 295 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 BTCP35070 178 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 MYCNOSP40205 109 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 HOXA1P49639 335 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-208ENST00000444533 SUPT4H1P63272 117 aaKnown RBP10.99□□□□□ -0.65
SSBP3-208ENST00000444533 ATP5G2Q06055 141 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 ASPHD1Q5U4P2 390 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 C8orf86Q6ZUL3 223 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 NECAP1Q8NC96 275 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 NDUFA4L2Q9NRX3 87 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 FLVCR2Q9UPI3 526 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 TMED3Q9Y3Q3 217 aa10.99□□□□□ -0.65
SSBP3-208ENST00000444533 TRAV6A0A075B6T7 132 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 C9orf170A2RU37 121 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 CCL24O00175 119 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 REG1AP05451 166 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 CRYGCP07315 174 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 H2AFB2P0C5Z0 115 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 MYOD1P15172 320 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 AREGP15514 252 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 ANXA7P20073 488 aaKnown RBP10.98□□□□□ -0.65
SSBP3-208ENST00000444533 CD33P20138 364 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 SNCAP37840 140 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 SUB1P53999 127 aaKnown RBP eCLIP10.98□□□□□ -0.65
SSBP3-208ENST00000444533 RHOGP84095 191 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 PRCDQ00LT1 54 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 SMCO1Q147U7 214 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 LYG2Q86SG7 212 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 LHFPL5Q8TAF8 219 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 MYOZ3Q8TDC0 251 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 OR5B12Q96R08 314 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 ALX4Q9H161 411 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-208ENST00000444533 CACNG5Q9UF02 275 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 TBC1D24Q9ULP9 559 aa10.98□□□□□ -0.65
SSBP3-208ENST00000444533 TNCP24821 2201 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 A0A0B4J293 547 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 A0A1B0GU03 582 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 IGLC7A0M8Q6 106 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 ADARB2-AS1A8MUL3 147 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 E7EUB6 86 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 ST8SIA3O43173 380 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 DUS4LO95620 317 aaKnown RBP10.97□□□□□ -0.65
SSBP3-208ENST00000444533 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
SSBP3-208ENST00000444533 CTRB1P17538 263 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 SPCS3P61009 180 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 DHRS2Q13268 280 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 IZUMO4Q1ZYL8 232 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 CTRB2Q6GPI1 263 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 SLC25A24Q6NUK1 477 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 PLET1Q6UQ28 207 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 LYZL2Q7Z4W2 148 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 LRTM2Q8N967 370 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 OR1S1Q8NH92 325 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 GPR146Q96CH1 333 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 CXorf58Q96LI9 332 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 PRR13Q9NZ81 148 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 FBXL7Q9UJT9 491 aa10.97□□□□□ -0.65
SSBP3-208ENST00000444533 CEBPZOSA8MTT3 80 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 OR2J3O76001 311 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 IGHV3-11P01762 117 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms