RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 MRPL16Q9NX20 251 aaKnown RBP3.17□□□□□ -1.9
VPS50-206ENST00000443443 CKLFQ9UBR5 152 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 TECPR2O15040 1411 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 ITGB4P16144 1822 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 VIRMAQ69YN4 1812 aaKnown RBP3.16□□□□□ -1.9
VPS50-206ENST00000443443 SIGLEC1Q9BZZ2 1709 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 TRDV1A0A1B0GX56 115 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 DHRS12A0PJE2 317 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 A8MWL6 223 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 HLA-DQB1P01920 261 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 HSPB1P04792 205 aaKnown RBP3.16□□□□□ -1.9
VPS50-206ENST00000443443 CD7P09564 240 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 NTF3P20783 257 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 KDELR1P24390 212 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 OPRM1P35372 400 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 MAXP61244 160 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 RPS11P62280 158 aaKnown RBP eCLIP3.16□□□□□ -1.9
VPS50-206ENST00000443443 RPS25P62851 125 aaKnown RBP3.16□□□□□ -1.9
VPS50-206ENST00000443443 EIF3IQ13347 325 aaKnown RBP3.16□□□□□ -1.9
VPS50-206ENST00000443443 RTL8BQ17RB0 113 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 OCIAD2Q56VL3 154 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 CGB2Q6NT52 195 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 SCXQ7RTU7 201 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 ZNF695Q8IW36 515 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 ZNF525Q8N782 197 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 OR4E2Q8NGC2 313 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 OR4C16Q8NGL9 310 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 SGMS2Q8NHU3 365 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 LMX1AQ8TE12 382 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 PRADC1Q9BSG0 188 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 CHAC1Q9BUX1 264 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 MRPS16Q9Y3D3 137 aaKnown RBP3.16□□□□□ -1.9
VPS50-206ENST00000443443 THSD7AQ9UPZ6 1657 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 FAM135BQ49AJ0 1406 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 VPS8Q8N3P4 1428 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 SPEF2Q9C093 1822 aa3.16□□□□□ -1.9
VPS50-206ENST00000443443 MYH3P11055 1940 aa3.15□□□□□ -1.9
VPS50-206ENST00000443443 ARAP3Q8WWN8 1544 aa3.15□□□□□ -1.9
VPS50-206ENST00000443443 C2orf16Q68DN1 1984 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 IGHV3-72A0A0B4J1Y9 119 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 A0A1B0GW64 132 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 NRASP01111 189 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 SRP19P09132 144 aaKnown RBP3.15□□□□□ -1.91
VPS50-206ENST00000443443 ATP6V0CP27449 155 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 CASP1P29466 404 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 RBMXP38159 391 aaKnown RBP3.15□□□□□ -1.91
VPS50-206ENST00000443443 RPL35P42766 123 aaKnown RBP3.15□□□□□ -1.91
VPS50-206ENST00000443443 SLC38A11Q08AI6 406 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 PDGFRLQ15198 375 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 OR8G1Q15617 311 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 MORN3Q6PF18 240 aaPredicted RBP3.15□□□□□ -1.91
VPS50-206ENST00000443443 TIFABQ6ZNK6 161 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 TMEM256Q8N2U0 113 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 FER1L6-AS1Q8NA97 138 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 C20orf203Q8NBC4 194 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 OR10G2Q8NGC3 310 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 OR52R1Q8NGF1 315 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 SLAMF6Q96DU3 332 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 YIPF3Q9GZM5 350 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 AICDAQ9GZX7 198 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 TAF9BQ9HBM6 251 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 NIT2Q9NQR4 276 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 OR5AC2Q9NZP5 309 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 NAT8Q9UHE5 227 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 TNS3Q68CZ2 1445 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 PPIP5K1Q6PFW1 1433 aa3.15□□□□□ -1.91
VPS50-206ENST00000443443 BAZ2AQ9UIF9 1905 aaKnown RBP3.15□□□□□ -1.91
VPS50-206ENST00000443443 IGLV11-55A0A075B6I3 123 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 TRAV38-1A0A0B4J264 116 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 IGHV5-51A0A0C4DH38 117 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 IGKV1-6A0A0C4DH72 117 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 IGHV7-4-1A0A0J9YVY3 117 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 TLCD2A6NGC4 264 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 IGLL5B9A064 214 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 GABARAPH6UMI1 98 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 H7BYZ3 331 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 PLA2G10O15496 165 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 IGKV1-39P01597 117 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 IGKV1D-39P04432 117 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 NFYBP25208 207 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 ZNF136P52737 540 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 TAS2R45P59539 299 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 PPP3R1P63098 170 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 KIAA0040Q15053 153 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 FAM78AQ5JUQ0 283 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 PRR15Q8IV56 129 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 IFT20Q8IY31 132 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 OR4A5Q8NH83 315 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 TMEM106AQ96A25 262 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 GPX7Q96SL4 187 aaPredicted RBP3.14□□□□□ -1.91
VPS50-206ENST00000443443 TM2D3Q9BRN9 247 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 HDHD3Q9BSH5 251 aaPredicted RBP3.14□□□□□ -1.91
VPS50-206ENST00000443443 C8orf17Q9NRJ1 99 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 HS3ST2Q9Y278 367 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 NEO1Q92859 1461 aa3.14□□□□□ -1.91
VPS50-206ENST00000443443 IGHV3-49A0A0A0MS15 119 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 IGHV5-10-1A0A0J9YXX1 117 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 A0A1B0GW54 56 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 MEIS3P1A6NDR6 274 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms