RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 TMEM80Q96HE8 168 aa10.05□□□□□ -0.8
LINC00642-202ENST00000442515 C15orf62A8K5M9 175 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 ZNF705EA8MWA4 302 aaPredicted RBP10.04□□□□□ -0.8
LINC00642-202ENST00000442515 PTGES3LE9PB15 166 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 J3QRK9 145 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 CD74P04233 296 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 CDK1P06493 297 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 GIG44P09565 113 aaPredicted RBP10.04□□□□□ -0.8
LINC00642-202ENST00000442515 HLA-GP17693 338 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 C12orf74Q32Q52 190 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 LEMD1Q68G75 181 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 AHSA2Q719I0 299 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 UBE2DNLQ8IWF7 75 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 GBGT1Q8N5D6 347 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 VN1R17PQ8TDU5 208 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 FCGR1BQ92637 280 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 RHPN1-AS1Q9BWJ2 59 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 THYN1Q9P016 225 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 SMPXQ9UHP9 88 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 KCNK7Q9Y2U2 307 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 X6R8D5 127 aa10.04□□□□□ -0.8
LINC00642-202ENST00000442515 IGLC7A0M8Q6 106 aa10.03□□□□□ -0.8
LINC00642-202ENST00000442515 CHEK1O14757 476 aa10.03□□□□□ -0.8
LINC00642-202ENST00000442515 CD37P11049 281 aa10.03□□□□□ -0.8
LINC00642-202ENST00000442515 CD36P16671 472 aa10.03□□□□□ -0.8
LINC00642-202ENST00000442515 OR2B8PP59922 312 aa10.03□□□□□ -0.8
LINC00642-202ENST00000442515 TBCEQ15813 527 aaPredicted RBP10.03□□□□□ -0.8
LINC00642-202ENST00000442515 ACSM3Q53FZ2 586 aa10.03□□□□□ -0.8
LINC00642-202ENST00000442515 SPSB3Q6PJ21 355 aa10.03□□□□□ -0.8
LINC00642-202ENST00000442515 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
LINC00642-202ENST00000442515 IGHV3-49A0A0A0MS15 119 aa10.02□□□□□ -0.81
LINC00642-202ENST00000442515 IGHV7-4-1A0A0J9YVY3 117 aa10.02□□□□□ -0.81
LINC00642-202ENST00000442515 IGLV2-14P01704 120 aa10.02□□□□□ -0.81
LINC00642-202ENST00000442515 BRWD1-AS2P59051 145 aa10.02□□□□□ -0.81
LINC00642-202ENST00000442515 TNP2Q05952 138 aa10.02□□□□□ -0.81
LINC00642-202ENST00000442515 GPR141Q7Z602 305 aa10.02□□□□□ -0.81
LINC00642-202ENST00000442515 OR56B1Q8NGI3 324 aa10.02□□□□□ -0.81
LINC00642-202ENST00000442515 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
LINC00642-202ENST00000442515 CCDC90BQ9GZT6 254 aa10.02□□□□□ -0.81
LINC00642-202ENST00000442515 IGHV3-21A0A0B4J1V1 117 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 F8W735 103 aaPredicted RBP10.01□□□□□ -0.81
LINC00642-202ENST00000442515 ZNF701M0R085 212 aaPredicted RBP10.01□□□□□ -0.81
LINC00642-202ENST00000442515 IFNA21P01568 189 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 IFNA17P01571 189 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 C4BPBP20851 252 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 DEFB131AP59861 70 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 ST3GAL4Q11206 333 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 NEDD8Q15843 81 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 HSD17B12Q53GQ0 312 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 UBE2UQ5VVX9 321 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 LIPKQ5VXJ0 399 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 FAM90A2PQ658T7 463 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 STHQ8IWL8 128 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 TMEM116Q8NCL8 245 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 ZNF414Q96IQ9 312 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 CMTM3Q96MX0 182 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 RBM38Q9H0Z9 239 aaKnown RBP10.01□□□□□ -0.81
LINC00642-202ENST00000442515 PLGRKTQ9HBL7 147 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 ACOT13Q9NPJ3 140 aa10.01□□□□□ -0.81
LINC00642-202ENST00000442515 IGHV3OR16-13A0A075B7E8 117 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 IGKV1D-8A0A087WSZ0 117 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 IGHV3-74A0A0B4J1X5 117 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 SLC17A2O00624 439 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 WNT4P56705 351 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 TIMM50Q3ZCQ8 353 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 FAM24BQ8N5W8 94 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 GDPD1Q8N9F7 314 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 UBAC2Q8NBM4 344 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 OR13F1Q8NGS4 319 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 DGCR14Q96DF8 476 aaKnown RBP10□□□□□ -0.81
LINC00642-202ENST00000442515 GFI1Q99684 422 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 BET1LQ9NYM9 111 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 C21orf62Q9NYP8 219 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 SPATA2Q9UM82 520 aa10□□□□□ -0.81
LINC00642-202ENST00000442515 MYL12BO14950 172 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 DFFBO76075 338 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 HRASP01112 189 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 CLDN12P56749 244 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 PAFAH1B2P68402 229 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 PLA2G7Q13093 441 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 EIF4EBP1Q13541 118 aaPredicted RBP9.99□□□□□ -0.81
LINC00642-202ENST00000442515 RAB11BQ15907 218 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 SSX1Q16384 188 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 TMEM41BQ5BJD5 291 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 TCF24Q7RTU0 167 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 ZNF367Q7RTV3 350 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 TRPT1Q86TN4 253 aaKnown RBP9.99□□□□□ -0.81
LINC00642-202ENST00000442515 GIMAP1Q8WWP7 306 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 RAB3CQ96E17 227 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 ATP6V0BQ99437 205 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 HSD17B10Q99714 261 aaKnown RBP9.99□□□□□ -0.81
LINC00642-202ENST00000442515 SRSF8Q9BRL6 282 aaKnown RBP9.99□□□□□ -0.81
LINC00642-202ENST00000442515 HRASLSQ9HDD0 168 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 CLEC5AQ9NY25 188 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 TAS2R8Q9NYW2 309 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 TBC1D24Q9ULP9 559 aa9.99□□□□□ -0.81
LINC00642-202ENST00000442515 IGKV1D-13A0A0B4J2D9 117 aa9.98□□□□□ -0.81
LINC00642-202ENST00000442515 NUPL2O15504 423 aaKnown RBP9.98□□□□□ -0.81
LINC00642-202ENST00000442515 CYB5BO43169 146 aa9.98□□□□□ -0.81
LINC00642-202ENST00000442515 HLA-DQB1P01920 261 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms