RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 RNF2Q99496 336 aa15.07■□□□□ 0
TRIM39-210ENST00000440271 SMPXQ9UHP9 88 aa15.07■□□□□ 0
TRIM39-210ENST00000440271 ETV7Q9Y603 341 aa15.07■□□□□ 0
TRIM39-210ENST00000440271 FAT2Q9NYQ8 4349 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 TRAV1-2A0A0B4J238 106 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 A0A1B0GVY2 172 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 C15orf62A8K5M9 175 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 XRCC3O43542 346 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 TFPI2P48307 235 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 GDPD1Q8N9F7 314 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 NUDCD2Q8WVJ2 157 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 MGLLQ99685 303 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 QTRT1Q9BXR0 403 aaKnown RBP15.06■□□□□ 0
TRIM39-210ENST00000440271 CCL28Q9NRJ3 127 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 ANXA10Q9UJ72 324 aa15.06■□□□□ 0
TRIM39-210ENST00000440271 IGHV3-21A0A0B4J1V1 117 aa15.05■□□□□ -0
TRIM39-210ENST00000440271 RBFOX2O43251 390 aaKnown RBP eCLIP15.05■□□□□ -0
TRIM39-210ENST00000440271 SERPINE2P07093 398 aa15.05■□□□□ -0
TRIM39-210ENST00000440271 OR13C7P0DN81 318 aa15.05■□□□□ -0
TRIM39-210ENST00000440271 TAS2R31P59538 309 aa15.05■□□□□ -0
TRIM39-210ENST00000440271 OGFRL1Q5TC84 451 aaPredicted RBP15.05■□□□□ -0
TRIM39-210ENST00000440271 ATP6V0BQ99437 205 aa15.05■□□□□ -0
TRIM39-210ENST00000440271 C21orf62Q9NYP8 219 aa15.05■□□□□ -0
TRIM39-210ENST00000440271 C11orf94C9JXX5 98 aa15.04■□□□□ -0
TRIM39-210ENST00000440271 F8W735 103 aaPredicted RBP15.04■□□□□ -0
TRIM39-210ENST00000440271 HPRT1P00492 218 aa15.04■□□□□ -0
TRIM39-210ENST00000440271 WT1-ASQ06250 92 aa15.04■□□□□ -0
TRIM39-210ENST00000440271 POU2AF1Q16633 256 aa15.04■□□□□ -0
TRIM39-210ENST00000440271 SCARB1Q8WTV0 552 aa15.04■□□□□ -0
TRIM39-210ENST00000440271 SECTM1Q8WVN6 248 aa15.04■□□□□ -0
TRIM39-210ENST00000440271 RHPN1-AS1Q9BWJ2 59 aa15.04■□□□□ -0
TRIM39-210ENST00000440271 DUSP21Q9H596 190 aa15.04■□□□□ -0
TRIM39-210ENST00000440271 TPRKBQ9Y3C4 175 aa15.04■□□□□ -0
TRIM39-210ENST00000440271 DNAH2Q9P225 4427 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 IGHV7-4-1A0A0J9YVY3 117 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 SULT1C2O00338 296 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 CHEK1O14757 476 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 MRPS14O60783 128 aaKnown RBP15.03■□□□□ -0
TRIM39-210ENST00000440271 CA1P00915 261 aaPredicted RBP15.03■□□□□ -0
TRIM39-210ENST00000440271 TRAPPC2P0DI81 140 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 TRAPPC2BP0DI82 140 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 NQO2P16083 231 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 RAB3BP20337 219 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 TMEM187Q14656 261 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 RCN1Q15293 331 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 MSMO1Q15800 293 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 THOC7Q6I9Y2 204 aaKnown RBP15.03■□□□□ -0
TRIM39-210ENST00000440271 ZNF773Q6PK81 442 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 UBAC2Q8NBM4 344 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 TMEM140Q9NV12 185 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 PKHD1P08F94 4074 aa15.03■□□□□ -0
TRIM39-210ENST00000440271 DNAH17Q9UFH2 4485 aa15.02■□□□□ -0
TRIM39-210ENST00000440271 IGKV3-7A0A075B6H7 116 aa15.02■□□□□ -0
TRIM39-210ENST00000440271 TEX50A0A1B0GTY4 177 aa15.02■□□□□ -0
TRIM39-210ENST00000440271 TMEM235A6NFC5 223 aa15.02■□□□□ -0
TRIM39-210ENST00000440271 RGS10O43665 173 aa15.02■□□□□ -0
TRIM39-210ENST00000440271 SSX5O60225 188 aa15.02■□□□□ -0
TRIM39-210ENST00000440271 FGF2P09038 288 aa15.02■□□□□ -0
TRIM39-210ENST00000440271 HSD17B13Q7Z5P4 300 aaPredicted RBP15.02■□□□□ -0
TRIM39-210ENST00000440271 TMEM116Q8NCL8 245 aa15.02■□□□□ -0
TRIM39-210ENST00000440271 ZBTB34Q8NCN2 500 aa15.02■□□□□ -0
TRIM39-210ENST00000440271 ABCA13Q86UQ4 5058 aa15.02□□□□□ -0.01
TRIM39-210ENST00000440271 IGHV3-49A0A0A0MS15 119 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 CASQ2O14958 399 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-210ENST00000440271 CTSGP08311 255 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 MYL9P24844 172 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 FCGR2CP31995 323 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 GNG2P59768 71 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 Q56UQ5 140 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 NR2C2APQ86WQ0 139 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 GBGT1Q8N5D6 347 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 DMBX1Q8NFW5 382 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 OR13F1Q8NGS4 319 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 ZNF414Q96IQ9 312 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 CCDC90BQ9GZT6 254 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 HRH4Q9H3N8 390 aa15.01□□□□□ -0.01
TRIM39-210ENST00000440271 F11RQ9Y624 299 aaKnown RBP15.01□□□□□ -0.01
TRIM39-210ENST00000440271 DYNC1H1Q14204 4646 aaKnown RBP15.01□□□□□ -0.01
TRIM39-210ENST00000440271 K7EIM0 57 aa15□□□□□ -0.01
TRIM39-210ENST00000440271 CATR1Q13166 79 aa15□□□□□ -0.01
TRIM39-210ENST00000440271 FAM90A2PQ658T7 463 aa15□□□□□ -0.01
TRIM39-210ENST00000440271 PLEKHA2Q9HB19 425 aa15□□□□□ -0.01
TRIM39-210ENST00000440271 MUC4Q99102 2169 aa15□□□□□ -0.01
TRIM39-210ENST00000440271 C15orf61A6NNL5 157 aa14.99□□□□□ -0.01
TRIM39-210ENST00000440271 PTHLHP12272 177 aa14.99□□□□□ -0.01
TRIM39-210ENST00000440271 Q8NAQ8 132 aa14.99□□□□□ -0.01
TRIM39-210ENST00000440271 OR1L8Q8NGR8 309 aa14.99□□□□□ -0.01
TRIM39-210ENST00000440271 OR10C1Q96KK4 312 aa14.99□□□□□ -0.01
TRIM39-210ENST00000440271 CMTM3Q96MX0 182 aa14.99□□□□□ -0.01
TRIM39-210ENST00000440271 SLC5A7Q9GZV3 580 aa14.99□□□□□ -0.01
TRIM39-210ENST00000440271 NDUFA4L2Q9NRX3 87 aa14.99□□□□□ -0.01
TRIM39-210ENST00000440271 YIF1AO95070 293 aa14.98□□□□□ -0.01
TRIM39-210ENST00000440271 PPYP01298 95 aa14.98□□□□□ -0.01
TRIM39-210ENST00000440271 HLA-DMBP28068 263 aa14.98□□□□□ -0.01
TRIM39-210ENST00000440271 ARPC4P59998 168 aa14.98□□□□□ -0.01
TRIM39-210ENST00000440271 RELQ04864 619 aaPredicted RBP14.98□□□□□ -0.01
TRIM39-210ENST00000440271 PRSS48Q7RTY5 328 aa14.98□□□□□ -0.01
TRIM39-210ENST00000440271 LSM10Q969L4 123 aaKnown RBP14.98□□□□□ -0.01
TRIM39-210ENST00000440271 HINT2Q9BX68 163 aa14.98□□□□□ -0.01
TRIM39-210ENST00000440271 VCXQ9H320 206 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms