RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FAIMQ9NVQ4 179 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 DMAC2Q9NW81 257 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF230Q9UIE0 474 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 C3orf18Q9UK00 162 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 U3KQK5 164 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 SONP18583 2426 aaKnown RBP1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 CNTRLQ7Z7A1 2325 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 TRPM6Q9BX84 2022 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 TGP01266 2768 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 SCN8AQ9UQD0 1980 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 GGTLC3B5MD39 225 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 TXNDC9O14530 226 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 LECT2O14960 151 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 PSIP1O75475 530 aaKnown RBP1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 GPR75O95800 540 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 OPN1SWP03999 348 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 MLNP12872 115 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 SLC25A16P16260 332 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 LGALS3P17931 250 aaKnown RBP1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 ATF1P18846 271 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 CBX5P45973 191 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 PSMD7P51665 324 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 RAB2AP61019 212 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 RPL26P61254 145 aaKnown RBP1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 SKP1P63208 163 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 PLGLB1Q02325 96 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 RPS19BP1Q86WX3 136 aaKnown RBP1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 NIT1Q86X76 327 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 TRAPPC5Q8IUR0 188 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 CPNE9Q8IYJ1 553 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 UMODL1-AS1Q8N2C9 162 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 YIPF7Q8N8F6 280 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR4A5Q8NH83 315 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 TAMM41Q96BW9 452 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 TVP23CQ96ET8 276 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 GPR22Q99680 433 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 MED18Q9BUE0 208 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF426Q9BUY5 554 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 NDEL1Q9GZM8 345 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF286AQ9HBT8 521 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 RPUSD1Q9UJJ7 312 aaKnown RBP1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 RPL26L1Q9UNX3 145 aaKnown RBP1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 TP53TG1Q9Y2A0 90 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 COQ4Q9Y3A0 265 aa1.51□□□□□ -2.17
HMGB1P27-201ENST00000431429 MGAM2Q2M2H8 2515 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 INTS1Q8N201 2190 aaKnown RBP1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 TRBV24-1A0A075B6N3 115 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 TRGV5A0A0B4J1U4 118 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 A0A0J9YY10 115 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 GOLGA6L10A6NI86 522 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 EEF1E1-BLOC1S5C9J1V9 151 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 FTCDNL1E5RQL4 147 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 PIN1P1O15428 100 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 EEF1E1O43324 174 aaKnown RBP1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 ADAP1O75689 374 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 KLHL2O95198 593 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 SOD1P00441 154 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 IGHMP01871 453 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 PSKH1P11801 424 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 COX6A1P12074 109 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 CRYGSP22914 178 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 SDC4P31431 198 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 HSPA13P48723 471 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 SPINT3P49223 89 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 RAB25P57735 213 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 TBC1D28Q2M2D7 210 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 SPIN3Q5JUX0 258 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 C10orf91Q5T1B1 145 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 HENMT1Q5T8I9 393 aaKnown RBP1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 DRAM2Q6UX65 266 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 SSX8Q7RTT4 187 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 PAGE2Q7Z2X7 111 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 LYZL2Q7Z4W2 148 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 C2orf73Q8N5S3 287 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 TMEM156Q8N614 296 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 FER1L6-AS1Q8NA97 138 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 TMEM35BQ8NCS4 154 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 LY6G5BQ8NDX9 201 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 STOML3Q8TAV4 291 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 SUN5Q8TC36 379 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 TRIB3Q96RU7 358 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 LYSMD1Q96S90 227 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 DUSP21Q9H596 190 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 SLC23A2Q9UGH3 650 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 C15orf41Q9Y2V0 281 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 NOSIPQ9Y314 301 aaKnown RBP1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 WNK1Q9H4A3 2382 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 MYH10P35580 1976 aa1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF106Q9H2Y7 1883 aaKnown RBP1.5□□□□□ -2.17
HMGB1P27-201ENST00000431429 ANK2Q01484 3957 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 PLXNB1O43157 2135 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 TNRC6AQ8NDV7 1962 aaKnown RBP1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 A0A0B4J2C4 111 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 C1orf232A0A0U1RR37 186 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 C3orf84H3BNL1 204 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 H3BSA7 217 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 LIN7AO14910 233 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 DENRO43583 198 aaKnown RBP1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 SH2D1AO60880 128 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 CRHP06850 196 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms