RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 RPL7P18124 248 aaKnown RBP6.45□□□□□ -1.38
SYNPO2-202ENST00000429713 ZDHHC23Q8IYP9 409 aa6.45□□□□□ -1.38
SYNPO2-202ENST00000429713 ABHD5Q8WTS1 349 aa6.45□□□□□ -1.38
SYNPO2-202ENST00000429713 AZU1P20160 251 aa6.45□□□□□ -1.38
SYNPO2-202ENST00000429713 CBLN3Q6UW01 205 aa6.45□□□□□ -1.38
SYNPO2-202ENST00000429713 CLEC5AQ9NY25 188 aa6.45□□□□□ -1.38
SYNPO2-202ENST00000429713 NEUROG3Q9Y4Z2 214 aa6.45□□□□□ -1.38
SYNPO2-202ENST00000429713 MPC1Q9Y5U8 109 aa6.45□□□□□ -1.38
SYNPO2-202ENST00000429713 ZNF658BQ4V348 819 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 VHLLQ6RSH7 139 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 GABRG2P18507 467 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 KIR2DL1P43626 348 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 OR4A5Q8NH83 315 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 PRSS27Q9BQR3 290 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 PRR13Q9NZ81 148 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 IGKV1-8A0A0C4DH67 115 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 PSG9Q00887 426 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 ATG4DQ86TL0 474 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 CCDC168Q8NDH2 2452 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 A0A1B0GUT8 65 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 H3BMG7 143 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 UPK3AO75631 287 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 CRYBA2P53672 197 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 P2RY6Q15077 328 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 MRPL23Q16540 153 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 GFERP55789 205 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 RPL31P62899 125 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 LHX8Q68G74 356 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 VN1R4Q7Z5H5 301 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 CACNG8Q8WXS5 425 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 C1QTNF4Q9BXJ3 329 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 IFI27L2Q9H2X8 130 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 H3BUT2 72 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 NDUFB4O95168 129 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 PSMB2P49721 201 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 NRN1LQ496H8 165 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 OR10X1Q8NGY0 326 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 VOPP1Q96AW1 172 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 FMC1Q96HJ9 113 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 HIGD1BQ9P298 99 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 SOCS1O15524 211 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 CER1O95813 267 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 ASAH2BP0C7U1 165 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 COL8A1P27658 744 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 DUSP2Q05923 314 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 SRSF1Q07955 248 aaKnown RBP eCLIP6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 FAM166AQ6J272 317 aa6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 MRPS18BQ9Y676 258 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-202ENST00000429713 NCOR2Q9Y618 2525 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 PRSS1P07477 247 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 C9orf50Q5SZB4 431 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 RTN4RL2Q86UN3 420 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 OR1B1Q8NGR6 318 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 RDH5Q92781 318 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 NKX2-8O15522 239 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 TSPAN13O95857 204 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 GPR6P46095 362 aaPredicted RBP6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 OR4F17Q8NGA8 305 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 PPP1CAP62136 330 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 CPAMD8Q8IZJ3 1885 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 YPEL1O60688 119 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 GAS1P54826 345 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 GFI1BQ5VTD9 330 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 LOXL4Q96JB6 756 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 Q96M66 194 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 YPEL2Q96QA6 119 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 GTSF1LQ9H1H1 148 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 PSG1P11464 419 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 TSPO2Q5TGU0 170 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 SFTPA1Q8IWL2 248 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 ST6GALNAC3Q8NDV1 305 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 CRYAAP02489 173 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 OR10AC1Q8NH08 325 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 TMEM160Q9NX00 188 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 ONECUT1Q9UBC0 465 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 SYS1-DBNDD2H3BUS1 97 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 K7EMI3 77 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 CXCL1P09341 107 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 SRD5A2P31213 254 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 TMEM108Q6UXF1 575 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 NPCDR1Q9BY65 106 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 C12orf49Q9H741 205 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 NRG2O14511 850 aaPredicted RBP6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 IGHG4P01861 327 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 PFN1P07737 140 aaKnown RBP6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 IGFBP3P17936 291 aaPredicted RBP6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 PRSS53Q2L4Q9 553 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 KLF17Q5JT82 389 aaPredicted RBP6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 LYZL2Q7Z4W2 148 aa6.43□□□□□ -1.38
SYNPO2-202ENST00000429713 LOC105371242A0A075B767 164 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 TRGV10A0A0A0MS01 117 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 PPIAL4CA0A0B4J2A2 164 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 HRKO00198 91 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 CCL25O15444 150 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 PPIAL4GP0DN37 164 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 CD27P26842 260 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 YRDCQ86U90 279 aaKnown RBP6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 TMEM116Q8NCL8 245 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms