RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 C15orf54Q8N8G6 183 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 BEND2Q8NDZ0 799 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 MANBALQ9NQG1 85 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 LSM4Q9Y4Z0 139 aaKnown RBP16.04■□□□□ 0.16
CASC4-203ENST00000429162 IGLV1-47P01700 117 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 RAB31Q13636 194 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 C2orf83Q53S99 150 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 TEPPQ6URK8 271 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 ITLN2Q8WWU7 325 aaPredicted RBP16.04■□□□□ 0.16
CASC4-203ENST00000429162 AMMECR1Q9Y4X0 333 aaPredicted RBP16.04■□□□□ 0.16
CASC4-203ENST00000429162 PXMP4Q9Y6I8 212 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 ZZEF1O43149 2961 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 NCOR2Q9Y618 2525 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 A0A1W2PN81 502 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 INS-IGF2F8WCM5 200 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 EIF3GO75821 320 aaKnown RBP eCLIP16.03■□□□□ 0.16
CASC4-203ENST00000429162 LY6HO94772 140 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 LIPFP07098 398 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 CHRNA7P36544 502 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 BSXQ3C1V8 233 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 LY6G5BQ8NDX9 201 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 TUBA4BQ9H853 241 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 CHODLQ9H9P2 273 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 NDUFA4L2Q9NRX3 87 aa16.03■□□□□ 0.16
CASC4-203ENST00000429162 SMG1Q96Q15 3661 aaKnown RBP16.03■□□□□ 0.16
CASC4-203ENST00000429162 HMGB3O15347 200 aaKnown RBP16.02■□□□□ 0.16
CASC4-203ENST00000429162 IGLV2-23P01705 113 aa16.02■□□□□ 0.16
CASC4-203ENST00000429162 GNLYP22749 145 aa16.02■□□□□ 0.16
CASC4-203ENST00000429162 UQCRFS1P47985 274 aa16.02■□□□□ 0.16
CASC4-203ENST00000429162 PSMB3P49720 205 aa16.02■□□□□ 0.16
CASC4-203ENST00000429162 TVP23CQ96ET8 276 aa16.02■□□□□ 0.16
CASC4-203ENST00000429162 NDUFS6O75380 124 aaKnown RBP16.02■□□□□ 0.15
CASC4-203ENST00000429162 LGALS7P47929 136 aa16.02■□□□□ 0.15
CASC4-203ENST00000429162 ERHP84090 104 aaKnown RBP16.02■□□□□ 0.15
CASC4-203ENST00000429162 FAM90A2PQ658T7 463 aa16.02■□□□□ 0.15
CASC4-203ENST00000429162 SLC35E3Q7Z769 313 aa16.02■□□□□ 0.15
CASC4-203ENST00000429162 ONECUT1Q9UBC0 465 aa16.02■□□□□ 0.15
CASC4-203ENST00000429162 YIF1AO95070 293 aa16.01■□□□□ 0.15
CASC4-203ENST00000429162 RNASE2P10153 161 aaKnown RBP16.01■□□□□ 0.15
CASC4-203ENST00000429162 MEF2BQ02080 365 aaPredicted RBP16.01■□□□□ 0.15
CASC4-203ENST00000429162 A0A1W2PPV4 95 aa16■□□□□ 0.15
CASC4-203ENST00000429162 BUB1B-PAK6H3BSN5 160 aa16■□□□□ 0.15
CASC4-203ENST00000429162 COX7A1P24310 79 aa16■□□□□ 0.15
CASC4-203ENST00000429162 TMEM249Q2WGJ8 235 aa16■□□□□ 0.15
CASC4-203ENST00000429162 MIC13Q5XKP0 118 aa16■□□□□ 0.15
CASC4-203ENST00000429162 IQCF2Q8IXL9 164 aa16■□□□□ 0.15
CASC4-203ENST00000429162 TMPRSS5Q9H3S3 457 aa16■□□□□ 0.15
CASC4-203ENST00000429162 PATZ1Q9HBE1 687 aaKnown RBP16■□□□□ 0.15
CASC4-203ENST00000429162 CHD8Q9HCK8 2581 aa16■□□□□ 0.15
CASC4-203ENST00000429162 COLCA2A8K830 154 aa16■□□□□ 0.15
CASC4-203ENST00000429162 C22orf46C9J442 243 aa16■□□□□ 0.15
CASC4-203ENST00000429162 ENSAO43768 121 aaKnown RBP16■□□□□ 0.15
CASC4-203ENST00000429162 GCSAMLQ5JQS6 135 aa16■□□□□ 0.15
CASC4-203ENST00000429162 C1orf159Q96HA4 380 aa16■□□□□ 0.15
CASC4-203ENST00000429162 ZNF430Q9H8G1 570 aaPredicted RBP16■□□□□ 0.15
CASC4-203ENST00000429162 SLC25A17O43808 307 aa15.99■□□□□ 0.15
CASC4-203ENST00000429162 B2MP61769 119 aa15.99■□□□□ 0.15
CASC4-203ENST00000429162 OR10W1Q8NGF6 305 aa15.99■□□□□ 0.15
CASC4-203ENST00000429162 INSIG2Q9Y5U4 225 aa15.99■□□□□ 0.15
CASC4-203ENST00000429162 IGHV1-3A0A0C4DH29 117 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 RPL29P47914 159 aaKnown RBP15.98■□□□□ 0.15
CASC4-203ENST00000429162 CD81P60033 236 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 FLI1Q01543 452 aaPredicted RBP15.98■□□□□ 0.15
CASC4-203ENST00000429162 PNRC1Q12796 327 aaPredicted RBP15.98■□□□□ 0.15
CASC4-203ENST00000429162 OR4P4Q8NGL7 312 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 SSMEM1Q8WWF3 244 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 A0A087WWC5 75 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 DEFA4P12838 97 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 DLX1P56177 255 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 TMEM144Q7Z5S9 345 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 STPG3Q8N7X2 389 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 TEX45Q8NA69 505 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 RPEQ96AT9 228 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 SSBP3Q9BWW4 388 aaPredicted RBP15.98■□□□□ 0.15
CASC4-203ENST00000429162 MLXQ9UH92 298 aa15.98■□□□□ 0.15
CASC4-203ENST00000429162 IGHV3-72A0A0B4J1Y9 119 aa15.97■□□□□ 0.15
CASC4-203ENST00000429162 A0A1W2PPR1 153 aa15.97■□□□□ 0.15
CASC4-203ENST00000429162 TMEM250H0YL14 139 aa15.97■□□□□ 0.15
CASC4-203ENST00000429162 MOB3BQ86TA1 216 aa15.97■□□□□ 0.15
CASC4-203ENST00000429162 PNKDQ8N490 385 aa15.97■□□□□ 0.15
CASC4-203ENST00000429162 UBTD1Q9HAC8 227 aa15.97■□□□□ 0.15
CASC4-203ENST00000429162 ITPR1Q14643 2758 aa15.97■□□□□ 0.15
CASC4-203ENST00000429162 B4DEV8 164 aa15.96■□□□□ 0.15
CASC4-203ENST00000429162 M0R1W7 72 aa15.96■□□□□ 0.15
CASC4-203ENST00000429162 MT-ND4LP03901 98 aa15.96■□□□□ 0.15
CASC4-203ENST00000429162 IGFBP2P18065 325 aa15.96■□□□□ 0.15
CASC4-203ENST00000429162 SUB1P53999 127 aaKnown RBP eCLIP15.96■□□□□ 0.15
CASC4-203ENST00000429162 CD69Q07108 199 aa15.96■□□□□ 0.15
CASC4-203ENST00000429162 MRPL41Q8IXM3 137 aaKnown RBP15.96■□□□□ 0.15
CASC4-203ENST00000429162 HIST1H2BAQ96A08 127 aa15.96■□□□□ 0.15
CASC4-203ENST00000429162 LOC105371242A0A075B767 164 aa15.96■□□□□ 0.14
CASC4-203ENST00000429162 FOLR2P14207 255 aa15.96■□□□□ 0.14
CASC4-203ENST00000429162 GPX4P36969 197 aaPredicted RBP15.96■□□□□ 0.14
CASC4-203ENST00000429162 GPR6P46095 362 aaPredicted RBP15.96■□□□□ 0.14
CASC4-203ENST00000429162 PRB3Q04118 309 aaPredicted RBP15.96■□□□□ 0.14
CASC4-203ENST00000429162 MMD2Q8IY49 270 aa15.96■□□□□ 0.14
CASC4-203ENST00000429162 CACNG8Q8WXS5 425 aa15.96■□□□□ 0.14
CASC4-203ENST00000429162 CGB1A6NKQ9 187 aa15.95■□□□□ 0.14
CASC4-203ENST00000429162 OR2C1O95371 312 aa15.95■□□□□ 0.14
CASC4-203ENST00000429162 STAG3L2P0CL84 134 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms