RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 OR5AC2Q9NZP5 309 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 ZFC3H1O60293 1989 aaKnown RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 TRGV4A0A0C4DH28 118 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 PROB1E7EW31 1015 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 SRIP30626 198 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 NANOS3P60323 173 aaKnown RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 ZXDCQ2QGD7 858 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 RNASE6Q93091 150 aaKnown RBP7.59□□□□□ -1.19
CTNND1-208ENST00000428599 SMIM8Q96KF7 97 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 KCNS1Q96KK3 526 aa7.59□□□□□ -1.19
CTNND1-208ENST00000428599 C1QTNF9BB2RNN3 333 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 SMIM13P0DJ93 91 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 CXCL3P19876 107 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 DSCR9P59020 149 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 RARRES2Q99969 163 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 UQCR10Q9UDW1 63 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 APC2O95996 2303 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 ATP5LO75964 103 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 ZNF324BQ6AW86 544 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-208ENST00000428599 PDCD11Q14690 1871 aaKnown RBP7.58□□□□□ -1.2
CTNND1-208ENST00000428599 OTX1P32242 354 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-208ENST00000428599 OR11H7Q8NGC8 314 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 OR9G4Q8NGQ1 327 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 PTPRFP10586 1907 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 ZNF414Q96IQ9 312 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 AICDAQ9GZX7 198 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 CBLN4Q9NTU7 201 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 MRPL16Q9NX20 251 aaKnown RBP7.58□□□□□ -1.2
CTNND1-208ENST00000428599 ZIC3O60481 467 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 IGHV3-11P01762 117 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 CDKN1AP38936 164 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 MIXL1Q9H2W2 232 aa7.58□□□□□ -1.2
CTNND1-208ENST00000428599 SCN2AQ99250 2005 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 PSCAO43653 123 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 ZNF506Q5JVG8 444 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 LRTM2Q8N967 370 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 ZNRF1Q8ND25 227 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 OR5AN1Q8NGI8 311 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 DMRTA2Q96SC8 542 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 LHFPL6Q9Y693 200 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 LILRA1O75019 489 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 MDKP21741 143 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-208ENST00000428599 ZNF415Q09FC8 603 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 ACP7Q6ZNF0 438 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 TMEM91Q6ZNR0 172 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 C9orf62Q8N4C0 152 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 CTHRC1Q96CG8 243 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 IFI27L2Q9H2X8 130 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 MRPS18AQ9NVS2 196 aaKnown RBP7.57□□□□□ -1.2
CTNND1-208ENST00000428599 GPR132Q9UNW8 380 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 PIKFYVEQ9Y2I7 2098 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 CD8AP01732 235 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 IGHV3-48P01763 117 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 AGAP20933 346 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 GCHFRP30047 84 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 IGLV3-21P80748 117 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-208ENST00000428599 IGLV1-36A0A0B4J1U3 117 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 TRAV8-6A0A0B4J262 113 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 TRBV5-5A0A0J9YX44 114 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 IFI6P09912 130 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 RPL39P5Q59GN2 51 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 MTURNQ8N3F0 131 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 S4R3C0 116 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 ASXL3Q9C0F0 2248 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 LOC102723996A0A087X1L8 192 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 OR1P1Q8NH06 330 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 FMC1Q96HJ9 113 aa7.57□□□□□ -1.2
CTNND1-208ENST00000428599 SPTA1P02549 2419 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 PEX7O00628 323 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 HOXA3O43365 443 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-208ENST00000428599 UCP3P55916 312 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 FAM206AQ9NX38 181 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 SPTBP11277 2137 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 DRAM1Q8N682 238 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 Q96M66 194 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 MTCL1Q9Y4B5 1905 aaKnown RBP7.56□□□□□ -1.2
CTNND1-208ENST00000428599 A0A1B0GW15 77 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 LIMS1P48059 325 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 OR10J3Q5JRS4 329 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 BIVMQ86UB2 503 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 NEUROG1Q92886 237 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 WFDC6Q9BQY6 131 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 CKAP5Q14008 2032 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 NBEAP1P0C6P0 100 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 CECR9P0C854 216 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 GPX4P36969 197 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-208ENST00000428599 ZNF818PQ6ZRF7 136 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 TTC9CQ8N5M4 171 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 AQP3Q92482 292 aa7.56□□□□□ -1.2
CTNND1-208ENST00000428599 TRGV11A0A075B6L2 103 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 ZNF646O15015 1829 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-208ENST00000428599 CD7P09564 240 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 C3orf36Q3SXR2 165 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 LOC390937A0A1W2PQ73 354 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 IFI27P40305 119 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-208ENST00000428599 P2RY4P51582 365 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 TDGF1P3P51864 188 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 IRF3Q14653 427 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 C1orf100Q5SVJ3 147 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 CENPWQ5EE01 88 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms