RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 UPK2O00526 184 aa12.26□□□□□ -0.45
VARS-216ENST00000428445 DEDDO75618 318 aa12.26□□□□□ -0.45
VARS-216ENST00000428445 PPYP01298 95 aa12.26□□□□□ -0.45
VARS-216ENST00000428445 PTBP1P26599 531 aaKnown RBP eCLIP12.26□□□□□ -0.45
VARS-216ENST00000428445 SDC2P34741 201 aa12.26□□□□□ -0.45
VARS-216ENST00000428445 OR5H6Q8NGV6 325 aa12.26□□□□□ -0.45
VARS-216ENST00000428445 LGALS14Q8TCE9 139 aa12.26□□□□□ -0.45
VARS-216ENST00000428445 ZNF436Q9C0F3 470 aaPredicted RBP12.26□□□□□ -0.45
VARS-216ENST00000428445 Q9H521 79 aa12.26□□□□□ -0.45
VARS-216ENST00000428445 PLEKHA2Q9HB19 425 aa12.26□□□□□ -0.45
VARS-216ENST00000428445 VPS13DQ5THJ4 4388 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 TRAV18A0A075B6X5 111 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 NUPR2A6NF83 97 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 CLEC2LP0C7M8 214 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 BMI1P35226 326 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 FXYD4P59646 89 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 TNFRSF9Q07011 255 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 ZNF124Q15973 351 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 ODF3L2Q3SX64 289 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 WFDC3Q8IUB2 231 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 OR5AP2Q8NGF4 316 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 OR13F1Q8NGS4 319 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 VN1R17PQ8TDU5 208 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 COMMD5Q9GZQ3 224 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 SLC5A7Q9GZV3 580 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 UFC1Q9Y3C8 167 aa12.25□□□□□ -0.45
VARS-216ENST00000428445 TGOLN2O43493 480 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 FCGR2BP31994 310 aaPredicted RBP12.24□□□□□ -0.45
VARS-216ENST00000428445 MFAP2P55001 183 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 SLC25A24Q6NUK1 477 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 DHRS11Q6UWP2 260 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 Q6ZWC4 215 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 SLC38A6Q8IZM9 456 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 OR5B3Q8NH48 314 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 OR51H1Q8NH63 302 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 CHRDL1Q9BU40 450 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 C5orf66Q9H5L9 145 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 RNF167Q9H6Y7 350 aa12.24□□□□□ -0.45
VARS-216ENST00000428445 MEIS3P1A6NDR6 274 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 OR13C7P0DN81 318 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 APOC4P55056 127 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 MXD1Q05195 221 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 WT1-ASQ06250 92 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 ZNF818PQ6ZRF7 136 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 CROCCP3Q8IVE0 287 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 APRG1Q8IVJ8 170 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 TMEM190Q8WZ59 177 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 RNF183Q96D59 192 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 SPAG8Q99932 426 aaPredicted RBP12.23□□□□□ -0.45
VARS-216ENST00000428445 C20orf24Q9BUV8 137 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 QTRT1Q9BXR0 403 aaKnown RBP12.23□□□□□ -0.45
VARS-216ENST00000428445 AUNIPQ9H7T9 357 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 TMEM140Q9NV12 185 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 COMMD9Q9P000 198 aa12.23□□□□□ -0.45
VARS-216ENST00000428445 HERC2O95714 4834 aa12.22□□□□□ -0.45
VARS-216ENST00000428445 TEX50A0A1B0GTY4 177 aa12.22□□□□□ -0.45
VARS-216ENST00000428445 TSPAN4O14817 238 aa12.22□□□□□ -0.45
VARS-216ENST00000428445 SPSB3Q6PJ21 355 aa12.22□□□□□ -0.45
VARS-216ENST00000428445 DMBX1Q8NFW5 382 aa12.22□□□□□ -0.45
VARS-216ENST00000428445 SLC25A38Q96DW6 304 aa12.22□□□□□ -0.45
VARS-216ENST00000428445 TP53TG1Q9Y2A0 90 aa12.22□□□□□ -0.45
VARS-216ENST00000428445 NSG2Q9Y328 171 aa12.22□□□□□ -0.45
VARS-216ENST00000428445 IGHV3-49A0A0A0MS15 119 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 F8W735 103 aaPredicted RBP12.21□□□□□ -0.45
VARS-216ENST00000428445 UBE2CO00762 179 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 XRCC3O43542 346 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 SERPINE2P07093 398 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 CTSDP07339 412 aaPredicted RBP12.21□□□□□ -0.45
VARS-216ENST00000428445 TRAPPC2P0DI81 140 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 TRAPPC2BP0DI82 140 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 IDNKQ5T6J7 187 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 LAMTOR1Q6IAA8 161 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 TMEM17Q86X19 198 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 STPG3Q8N7X2 389 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 UBAC2Q8NBM4 344 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.45
VARS-216ENST00000428445 S100A16Q96FQ6 103 aaKnown RBP12.21□□□□□ -0.45
VARS-216ENST00000428445 ZNF414Q96IQ9 312 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 HINT2Q9BX68 163 aa12.21□□□□□ -0.45
VARS-216ENST00000428445 IGKV3-7A0A075B6H7 116 aa12.2□□□□□ -0.46
VARS-216ENST00000428445 GNRHRP30968 328 aa12.2□□□□□ -0.46
VARS-216ENST00000428445 ADMP35318 185 aa12.2□□□□□ -0.46
VARS-216ENST00000428445 TFPI2P48307 235 aa12.2□□□□□ -0.46
VARS-216ENST00000428445 AADACL3Q5VUY0 350 aa12.2□□□□□ -0.46
VARS-216ENST00000428445 GDPD1Q8N9F7 314 aa12.2□□□□□ -0.46
VARS-216ENST00000428445 SCARB1Q8WTV0 552 aa12.2□□□□□ -0.46
VARS-216ENST00000428445 BSCL2Q96G97 398 aaPredicted RBP12.2□□□□□ -0.46
VARS-216ENST00000428445 MAP6D1Q9H9H5 199 aa12.2□□□□□ -0.46
VARS-216ENST00000428445 FKBP11Q9NYL4 201 aa12.2□□□□□ -0.46
VARS-216ENST00000428445 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
VARS-216ENST00000428445 K7EMT4 169 aa12.19□□□□□ -0.46
VARS-216ENST00000428445 NDUFA4O00483 81 aa12.19□□□□□ -0.46
VARS-216ENST00000428445 ATF4P18848 351 aaPredicted RBP12.19□□□□□ -0.46
VARS-216ENST00000428445 F2RP25116 425 aa12.19□□□□□ -0.46
VARS-216ENST00000428445 HERV-K104P61576 105 aa12.19□□□□□ -0.46
VARS-216ENST00000428445 ERVK-16P61578 105 aa12.19□□□□□ -0.46
VARS-216ENST00000428445 RNF2Q99496 336 aa12.19□□□□□ -0.46
VARS-216ENST00000428445 DAZ1Q9NQZ3 744 aaKnown RBP12.19□□□□□ -0.46
VARS-216ENST00000428445 NDUFA4L2Q9NRX3 87 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms