RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 WASHC3Q9Y3C0 194 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 HDGFL3Q9Y3E1 203 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 IGHV3OR16-13A0A075B7E8 117 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 IGHV6-1A0A0B4J1U7 121 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 IGHV2-26A0A0B4J1V2 119 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 CCL25O15444 150 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 KCNK2O95069 426 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 APOMO95445 188 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 OR4Q2P0C623 313 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 S100A7P31151 101 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 NCS1P62166 190 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 BIKQ13323 160 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 TWIST1Q15672 202 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 SSX1Q16384 188 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 MESTQ5EB52 335 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 C10orf25Q5T742 122 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 SUMO4Q6EEV6 95 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 HSD17B13Q7Z5P4 300 aaPredicted RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 NFE4Q86UQ8 179 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 TMEM86AQ8N2M4 240 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 FAM24BQ8N5W8 94 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 OR5W2Q8NH69 310 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 RAB2BQ8WUD1 216 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 RTN4IP1Q8WWV3 396 aaPredicted RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 METTL26Q96S19 204 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 NRTNQ99748 197 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 SFXN3Q9BWM7 321 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 Q9H521 79 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 METTL1Q9UBP6 276 aaKnown RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 C14orf166Q9Y224 244 aaKnown RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 A0A087WXM4 84 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 C5orf49A4QMS7 147 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 NDUFS5O43920 106 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 HLA-DQB1P01920 261 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 APODP05090 189 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 GABRA3P34903 492 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 MRPS21P82921 87 aaKnown RBP2.34□□□□□ -2.03
RGPD1-203ENST00000428128 ERCC8Q13216 396 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 CCSMST1Q4G0I0 132 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 PRR30Q53SZ7 412 aaPredicted RBP2.34□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF343Q6P1L6 599 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF773Q6PK81 442 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 SCIMPQ6UWF3 145 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 DNM1P46Q6ZS02 220 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 CDC20BQ86Y33 519 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 OR52P1PQ8NH57 321 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 MBD3L1Q8WWY6 194 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 ST6GAL2Q96JF0 529 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF354BQ96LW1 612 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 TMPRSS5Q9H3S3 457 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 CST9LQ9H4G1 147 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 MYO15AQ9UKN7 3530 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 HUWE1Q7Z6Z7 4374 aaKnown RBP2.34□□□□□ -2.03
RGPD1-203ENST00000428128 DSPP15924 2871 aaKnown RBP2.34□□□□□ -2.03
RGPD1-203ENST00000428128 TRAV30A0A087WSZ9 112 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 LINC01548A6NM66 108 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 H0YJW9 148 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 OVOL1O14753 267 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 FAM20BO75063 409 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 CRYBA1P05813 215 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 PRSS1P07477 247 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 FGF6P10767 208 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 HLA-EP13747 358 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 CTSEP14091 401 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 PSMB8P28062 276 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 GABRA2P47869 451 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 TAS2R30P59541 319 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 PPP3R1P63098 170 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 DAZ2Q13117 558 aaKnown RBP2.34□□□□□ -2.03
RGPD1-203ENST00000428128 Q5BKY6 102 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 C12orf54Q6X4T0 127 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF620Q6ZNG0 422 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 DAZ4Q86SG3 579 aaKnown RBP2.34□□□□□ -2.03
RGPD1-203ENST00000428128 TMEM229BQ8NBD8 167 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 OR4E2Q8NGC2 313 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 OR52R1Q8NGF1 315 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 OR51E1Q8TCB6 317 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 S100ZQ8WXG8 99 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 VOPP1Q96AW1 172 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 GABARAPL1Q9H0R8 117 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 NIT2Q9NQR4 276 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 DAZ1Q9NQZ3 744 aaKnown RBP2.34□□□□□ -2.03
RGPD1-203ENST00000428128 DAZ3Q9NR90 486 aaKnown RBP2.34□□□□□ -2.03
RGPD1-203ENST00000428128 NUFIP1Q9UHK0 495 aaKnown RBP2.34□□□□□ -2.03
RGPD1-203ENST00000428128 DOCK4Q8N1I0 1966 aa2.34□□□□□ -2.03
RGPD1-203ENST00000428128 POLQO75417 2590 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 CREBBPQ92793 2442 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 TRAV8-6A0A0B4J262 113 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 MGST3O14880 152 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 PI3P19957 117 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 NDUFA6P56556 154 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF846Q147U1 533 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 OGFOD2Q6N063 350 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 CLEC19AQ6UXS0 136 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 NAA40Q86UY6 237 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 TCTE3Q8IZS6 198 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 PLPP5Q8NEB5 264 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 RHOXF1Q8NHV9 184 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 ARL11Q969Q4 196 aa2.34□□□□□ -2.04
RGPD1-203ENST00000428128 OR2M4Q96R27 311 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms