RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZNF785A8K8V0 405 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 M0QYG6 137 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 GABARAPO95166 117 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 FGF2P09038 288 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 CD7P09564 240 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 OR13C7P0DN81 318 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 WT1-ASQ06250 92 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 GUCA2BQ16661 112 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 HAGHQ16775 308 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 GDPD1Q8N9F7 314 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 OR1L8Q8NGR8 309 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 WDR89Q96FK6 387 aaPredicted RBP13.89□□□□□ -0.19
PSPC1-202ENST00000427943 NEURL2Q9BR09 285 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 WFDC10AQ9H1F0 79 aa13.89□□□□□ -0.19
PSPC1-202ENST00000427943 IGHV3-35A0A0C4DH35 117 aa13.88□□□□□ -0.19
PSPC1-202ENST00000427943 TMEM213A2RRL7 107 aa13.88□□□□□ -0.19
PSPC1-202ENST00000427943 CLEC3BP05452 202 aa13.88□□□□□ -0.19
PSPC1-202ENST00000427943 CBLN1P23435 193 aa13.88□□□□□ -0.19
PSPC1-202ENST00000427943 CTF1Q16619 201 aa13.88□□□□□ -0.19
PSPC1-202ENST00000427943 FAM106AQ4KMX7 169 aa13.88□□□□□ -0.19
PSPC1-202ENST00000427943 THOC7Q6I9Y2 204 aaKnown RBP13.88□□□□□ -0.19
PSPC1-202ENST00000427943 TBC1D26Q86UD7 250 aa13.88□□□□□ -0.19
PSPC1-202ENST00000427943 ZNF502Q8TBZ5 544 aa13.88□□□□□ -0.19
PSPC1-202ENST00000427943 OR51B2Q9Y5P1 312 aa13.88□□□□□ -0.19
PSPC1-202ENST00000427943 A8MWP6 167 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 SNAPC5O75971 98 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 SERPINE2P07093 398 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 GPR107Q5VW38 600 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 MZT2AQ6P582 158 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 UNQ9165/PRO28630Q6UXU0 137 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 LAX1Q8IWV1 398 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 LSM10Q969L4 123 aaKnown RBP13.87□□□□□ -0.19
PSPC1-202ENST00000427943 SPATA25Q9BR10 227 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 NDUFA4L2Q9NRX3 87 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 SLC2A8Q9NY64 477 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 TECRQ9NZ01 308 aaKnown RBP13.87□□□□□ -0.19
PSPC1-202ENST00000427943 THYN1Q9P016 225 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 MLXQ9UH92 298 aa13.87□□□□□ -0.19
PSPC1-202ENST00000427943 IGHV3-21A0A0B4J1V1 117 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 DBX1A6NMT0 343 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 TPPPO94811 219 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 S100GP29377 79 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 MFAP2P55001 183 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 SLC25A24Q6NUK1 477 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 LPCAT3Q6P1A2 487 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 TMEM61Q8N0U2 210 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 DEFB125Q8N687 156 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 AP3S1Q92572 193 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 CITED4Q96RK1 184 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 RETNQ9HD89 108 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 EXTL2Q9UBQ6 330 aa13.86□□□□□ -0.19
PSPC1-202ENST00000427943 CYB5BO43169 146 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 PTBP1P26599 531 aaKnown RBP eCLIP13.85□□□□□ -0.19
PSPC1-202ENST00000427943 TM4SF20Q53R12 229 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 CASC10Q5T4H9 136 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 ZNF57Q68EA5 555 aaPredicted RBP13.85□□□□□ -0.19
PSPC1-202ENST00000427943 PLET1Q6UQ28 207 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 BTNL8Q6UX41 500 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 HSD17B13Q7Z5P4 300 aaPredicted RBP13.85□□□□□ -0.19
PSPC1-202ENST00000427943 SLC38A6Q8IZM9 456 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 UXS1Q8NBZ7 420 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 KLK11Q9UBX7 282 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 PRNDQ9UKY0 176 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 F11RQ9Y624 299 aaKnown RBP13.85□□□□□ -0.19
PSPC1-202ENST00000427943 CEPT1Q9Y6K0 416 aa13.85□□□□□ -0.19
PSPC1-202ENST00000427943 OR2T8A6NH00 312 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 C15orf61A6NNL5 157 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 TGOLN2O43493 480 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 SCAF4O95104 1147 aaKnown RBP13.84□□□□□ -0.19
PSPC1-202ENST00000427943 IGKV1-39P01597 117 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 IGKV1D-39P04432 117 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 ZNF182P17025 639 aaPredicted RBP13.84□□□□□ -0.19
PSPC1-202ENST00000427943 UCP3P55916 312 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 OR52I2Q8NH67 350 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 VN1R17PQ8TDU5 208 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 MRGPRFQ96AM1 343 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 SRD5A3Q9H8P0 318 aa13.84□□□□□ -0.19
PSPC1-202ENST00000427943 PGAM2P15259 253 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 PI3P19957 117 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 RNASE10Q5GAN6 216 aaKnown RBP13.83□□□□□ -0.2
PSPC1-202ENST00000427943 LINC00322Q6ZN03 302 aaPredicted RBP13.83□□□□□ -0.2
PSPC1-202ENST00000427943 CADM3Q8N126 398 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 OR5B3Q8NH48 314 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 ISOC1Q96CN7 298 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 SEC22AQ96IW7 307 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 TSC22D3Q99576 134 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 MRPS26Q9BYN8 205 aaKnown RBP13.83□□□□□ -0.2
PSPC1-202ENST00000427943 EDA2RQ9HAV5 297 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 PALMDQ9NP74 551 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 FAM212BQ9NTI7 297 aaPredicted RBP13.83□□□□□ -0.2
PSPC1-202ENST00000427943 TMEM14BQ9NUH8 114 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 RYR3Q15413 4870 aa13.83□□□□□ -0.2
PSPC1-202ENST00000427943 OR11H12B2RN74 326 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 CD3DP04234 171 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 IFNA6P05013 189 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 LYL1P12980 280 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 PPP5CP53041 499 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 ZFAND6Q6FIF0 208 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 H2BFWTQ7Z2G1 175 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 UBAC2Q8NBM4 344 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms