RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 PARVGQ9HBI0 331 aa1.31□□□□□ -2.2
GCFC2-203ENST00000427862 SCAF11Q99590 1463 aaKnown RBP1.31□□□□□ -2.2
GCFC2-203ENST00000427862 PTPRSQ13332 1948 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 FBN3Q75N90 2809 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.3□□□□□ -2.2
GCFC2-203ENST00000427862 TRBV10-2A0A0K0K1G8 114 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 IRGMA1A4Y4 181 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 EEF1E1-BLOC1S5C9J1V9 151 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 ORC5O43913 435 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 TRGC1P0CF51 173 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 HIST1H1EP10412 219 aaKnown RBP1.3□□□□□ -2.2
GCFC2-203ENST00000427862 FXYD2P54710 66 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 UBE2IP63279 158 aaKnown RBP1.3□□□□□ -2.2
GCFC2-203ENST00000427862 NDUFA5Q16718 116 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 GUK1Q16774 197 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 Q1T7F1 81 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 IBA57Q5T440 356 aaKnown RBP1.3□□□□□ -2.2
GCFC2-203ENST00000427862 FAM27BQ5VT28 67 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 C7orf65Q6ZTY9 151 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 OR51D1Q8NGF3 324 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 MBD3L1Q8WWY6 194 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 SLC35B4Q969S0 331 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 IMP4Q96G21 291 aaKnown RBP1.3□□□□□ -2.2
GCFC2-203ENST00000427862 Q96M85 177 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 RETNLBQ9BQ08 111 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 EFCAB1Q9HAE3 211 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 IL36BQ9NZH7 164 aa1.3□□□□□ -2.2
GCFC2-203ENST00000427862 SMARCA4P51532 1647 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
GCFC2-203ENST00000427862 A0A0J9YY10 115 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 TRBV6-5A0A0K0K1A5 114 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 A0A1B0GX78 115 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 GGT3PA6NGU5 568 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 FABP5P3A8MUU1 101 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 TRAPPC2LH3BP13 241 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 TNNC2P02585 160 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 CRPP02741 224 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 ANGP03950 147 aaKnown RBP1.29□□□□□ -2.2
GCFC2-203ENST00000427862 PRM2P04554 102 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 ARL14EPLP0DKL9 152 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 CCL20P78556 96 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 OR2F1Q13607 317 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 ELOBQ15370 118 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 NNATQ16517 81 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 MOGQ16653 247 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 ARHGAP11BQ3KRB8 267 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 ALKAL1Q6UXT8 129 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 RPS19BP1Q86WX3 136 aaKnown RBP1.29□□□□□ -2.2
GCFC2-203ENST00000427862 OR52E6Q96RD3 313 aa1.29□□□□□ -2.2
GCFC2-203ENST00000427862 ZFHX2Q9C0A1 2572 aaPredicted RBP1.28□□□□□ -2.2
GCFC2-203ENST00000427862 HELZ2Q9BYK8 2649 aaKnown RBP1.28□□□□□ -2.2
GCFC2-203ENST00000427862 TRAPPC13A5PLN9 417 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 RPSAP08865 295 aaKnown RBP1.28□□□□□ -2.2
GCFC2-203ENST00000427862 METTL15P1P0C7V9 234 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 SPCS3P61009 180 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 IFITM2Q01629 132 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 IMPG1Q17R60 797 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 C8orf74Q6P047 294 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 FP248Q71RG6 208 aaPredicted RBP1.28□□□□□ -2.2
GCFC2-203ENST00000427862 DCXRQ7Z4W1 244 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 C20orf196Q8IYI0 205 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 TMEM86BQ8N661 226 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 OR8B3Q8NGG8 313 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 OR2T4Q8NH00 348 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 CISHQ9NSE2 258 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 ADCY9O60503 1353 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 NUMA1Q14980 2115 aa1.28□□□□□ -2.2
GCFC2-203ENST00000427862 MED13Q9UHV7 2174 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 IBA57-AS1B1ANH7 110 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 SDCBPO00560 298 aaPredicted RBP1.27□□□□□ -2.21
GCFC2-203ENST00000427862 IFNA16P05015 189 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 SULT1A1P50225 295 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 PSME3P61289 254 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 SYPL2Q5VXT5 272 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 FAM173BQ6P4H8 233 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 Q6ZS49 121 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 DHFR2Q86XF0 187 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 C9orf163Q8N9P6 203 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 OR5B17Q8NGF7 314 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 C11orf40Q8WZ69 217 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 WDR61Q9GZS3 305 aaKnown RBP1.27□□□□□ -2.21
GCFC2-203ENST00000427862 PTPRBP23467 1997 aa1.27□□□□□ -2.21
GCFC2-203ENST00000427862 GLI3P10071 1580 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 MALRD1Q5VYJ5 2156 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 TGIF2-C20orf24A0A0A6YYL0 155 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 CD79AP11912 226 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 RPS4Y1P22090 263 aaKnown RBP1.26□□□□□ -2.21
GCFC2-203ENST00000427862 ZNF80P51504 273 aaPredicted RBP1.26□□□□□ -2.21
GCFC2-203ENST00000427862 AADACL3Q5VUY0 350 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 LRRC25Q8N386 305 aaPredicted RBP1.26□□□□□ -2.21
GCFC2-203ENST00000427862 MCFD2Q8NI22 146 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 MRPL30Q8TCC3 161 aaKnown RBP1.26□□□□□ -2.21
GCFC2-203ENST00000427862 VPS29Q9UBQ0 182 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 BAIAP2Q9UQB8 552 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 LHFPL6Q9Y693 200 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 CCDC88CQ9P219 2028 aa1.26□□□□□ -2.21
GCFC2-203ENST00000427862 PSMD12O00232 456 aaPredicted RBP1.25□□□□□ -2.21
GCFC2-203ENST00000427862 MRPS14O60783 128 aaKnown RBP1.25□□□□□ -2.21
GCFC2-203ENST00000427862 SUPT4H1P63272 117 aaKnown RBP1.25□□□□□ -2.21
GCFC2-203ENST00000427862 STX5Q13190 355 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms