RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 AURKAIP1Q9NWT8 199 aaPredicted RBP7.15□□□□□ -1.26
SNCA-206ENST00000420646 A0A1W2PRD5 423 aa7.15□□□□□ -1.27
SNCA-206ENST00000420646 A0A1W2PRF3 423 aa7.15□□□□□ -1.27
SNCA-206ENST00000420646 A0A1W2PRM7 423 aa7.15□□□□□ -1.27
SNCA-206ENST00000420646 HSPE1P61604 102 aaKnown RBP7.15□□□□□ -1.27
SNCA-206ENST00000420646 NANPQ8TBE9 248 aa7.15□□□□□ -1.27
SNCA-206ENST00000420646 MGST2Q99735 147 aa7.15□□□□□ -1.27
SNCA-206ENST00000420646 H0YJW9 148 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 REG1AP05451 166 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 CNTFRP26992 372 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 TAGLN2P37802 199 aaKnown RBP7.14□□□□□ -1.27
SNCA-206ENST00000420646 ZNF672Q499Z4 452 aaPredicted RBP7.14□□□□□ -1.27
SNCA-206ENST00000420646 OR51G1Q8NGK1 321 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 MBD3L1Q8WWY6 194 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 SMCO4Q9NRQ5 59 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 UBR5O95071 2799 aaPredicted RBP7.14□□□□□ -1.27
SNCA-206ENST00000420646 TEX50A0A1B0GTY4 177 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 PRSS46E5RG02 174 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 YIF1AO95070 293 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 HBE1P02100 147 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 MEOX2P50222 304 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 CD81P60033 236 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 RTL8BQ17RB0 113 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 FAM90A2PQ658T7 463 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 ZNF833PQ6ZTB9 187 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 SLC24A4Q8NFF2 622 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 HIST1H2BAQ96A08 127 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 RPUSD4Q96CM3 377 aaKnown RBP7.14□□□□□ -1.27
SNCA-206ENST00000420646 NCOR1P1Q9H4R4 102 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 BTBD17A6NE02 478 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 PAGE4O60829 102 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 HRASP01112 189 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 SNRPCP09234 159 aaKnown RBP7.14□□□□□ -1.27
SNCA-206ENST00000420646 IGHV1-8P0DP01 117 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 CD24P25063 80 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 NPY1RP25929 384 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 DLX6P56179 175 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 MEF2CQ06413 473 aaPredicted RBP7.14□□□□□ -1.27
SNCA-206ENST00000420646 SPATA31B1PQ5VZV4 182 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 OR5T1Q8NG75 326 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 WDR83OSQ9Y284 106 aa7.14□□□□□ -1.27
SNCA-206ENST00000420646 IGKV1OR2-108A0A075B7D4 117 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 A0A1B0GW64 132 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 ITGB1BP1O14713 200 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 SLC25A17O43808 307 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 ACTL6BO94805 426 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 HSPB1P04792 205 aaKnown RBP7.13□□□□□ -1.27
SNCA-206ENST00000420646 IGFBP2P18065 325 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 MDKP21741 143 aaPredicted RBP7.13□□□□□ -1.27
SNCA-206ENST00000420646 CDKN1AP38936 164 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 EFNB3Q15768 340 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 ATP6V1FQ16864 119 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 VWC2Q2TAL6 325 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 AARDQ4LEZ3 155 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 TMEM155Q4W5P6 130 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 KHDC3LQ587J8 217 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 ZNF841Q6ZN19 808 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 SLC16A13Q7RTY0 426 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 FLYWCH2Q96CP2 140 aaKnown RBP7.13□□□□□ -1.27
SNCA-206ENST00000420646 SSX3Q99909 188 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 SEPSECSQ9HD40 501 aaKnown RBP7.13□□□□□ -1.27
SNCA-206ENST00000420646 SIRT7Q9NRC8 400 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 ZANQ9Y493 2812 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 TRAV1-1A0A0B4J248 108 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 UPK2O00526 184 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 KBTBD11O94819 623 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 RAB13P51153 203 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 CLEC12BQ2HXU8 276 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 PDLIM3Q53GG5 364 aaPredicted RBP7.13□□□□□ -1.27
SNCA-206ENST00000420646 DPPA3Q6W0C5 159 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 LHFPL4Q7Z7J7 247 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.13□□□□□ -1.27
SNCA-206ENST00000420646 ABHD5Q8WTS1 349 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 NABP2Q9BQ15 211 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 NIPSNAP3BQ9BS92 247 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 RAB9BQ9NP90 201 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 ENY2Q9NPA8 101 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 BIN3Q9NQY0 253 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 GAB2Q9UQC2 676 aa7.13□□□□□ -1.27
SNCA-206ENST00000420646 FOXA2Q9Y261 457 aaPredicted RBP7.13□□□□□ -1.27
SNCA-206ENST00000420646 IGHV3-21A0A0B4J1V1 117 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 FOXH1O75593 365 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 OR2C1O95371 312 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 KIR2DS2P43631 304 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 LDLRAD2Q5SZI1 272 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 RUSC1-AS1Q66K80 236 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 CENPVQ7Z7K6 275 aaPredicted RBP7.12□□□□□ -1.27
SNCA-206ENST00000420646 OR4F5Q8NH21 305 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 OR4F4Q96R69 305 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 GGTLC1Q9BX51 225 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 PLEKHA3Q9HB20 300 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 PXMP4Q9Y6I8 212 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 ITPR3Q14573 2671 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 ITPR2Q14571 2701 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 CDC34P49427 236 aaPredicted RBP7.12□□□□□ -1.27
SNCA-206ENST00000420646 ARF6P62330 175 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 TGIF2LXQ8IUE1 241 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 OR5AN1Q8NGI8 311 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 OR52E5Q8NH55 327 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 OR2T6Q8NHC8 308 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms