RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 NAA50Q9GZZ1 169 aaKnown RBP9.47□□□□□ -0.89
LINC00339-203ENST00000420503 C5orf66Q9H5L9 145 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 HRASLSQ9HDD0 168 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 MRPL27Q9P0M9 148 aaKnown RBP9.47□□□□□ -0.89
LINC00339-203ENST00000420503 KLK5Q9Y337 293 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-203ENST00000420503 DNAH2Q9P225 4427 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 TRBV7-1A0A0A6YYK4 115 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 SULT1C2O00338 296 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 TSPAN4O14817 238 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 TGOLN2O43493 480 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 CTSDP07339 412 aaPredicted RBP9.46□□□□□ -0.9
LINC00339-203ENST00000420503 ADMP35318 185 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 MAS1LP35410 378 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 RPS19P39019 145 aaKnown RBP9.46□□□□□ -0.9
LINC00339-203ENST00000420503 NCS1P62166 190 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 HACD4Q5VWC8 232 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 LGALS9CQ6DKI2 356 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 GVQW1Q8N7I0 195 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 STPG3Q8N7X2 389 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 VSTM2AQ8TAG5 236 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 SECTM1Q8WVN6 248 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 MARC2Q969Z3 335 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 HSD17B10Q99714 261 aaKnown RBP9.46□□□□□ -0.9
LINC00339-203ENST00000420503 C20orf24Q9BUV8 137 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 FBXL17Q9UF56 701 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 DAPK2Q9UIK4 370 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 UFC1Q9Y3C8 167 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 AGRNO00468 2067 aa9.46□□□□□ -0.9
LINC00339-203ENST00000420503 DYNC1H1Q14204 4646 aaKnown RBP9.46□□□□□ -0.9
LINC00339-203ENST00000420503 IGKV3-7A0A075B6H7 116 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 UPK2O00526 184 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 HIST1H1BP16401 226 aaKnown RBP9.45□□□□□ -0.9
LINC00339-203ENST00000420503 TFPI2P48307 235 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 SCAND1P57086 179 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 VBP1P61758 197 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 WT1-ASQ06250 92 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 GPR107Q5VW38 600 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 CNIH2Q6PI25 160 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 GPR141Q7Z602 305 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 SLC38A6Q8IZM9 456 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 SPAG16Q8N0X2 631 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 BET1LQ9NYM9 111 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 ANXA10Q9UJ72 324 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 PKHD1P08F94 4074 aa9.45□□□□□ -0.9
LINC00339-203ENST00000420503 IGHV3OR16-13A0A075B7E8 117 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 IGHV3-74A0A0B4J1X5 117 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 TMEM127O75204 238 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 DHFRP00374 187 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 PTBP1P26599 531 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00339-203ENST00000420503 FCGR2CP31995 323 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 RPL5P46777 297 aaKnown RBP9.44□□□□□ -0.9
LINC00339-203ENST00000420503 LGALS14Q8TCE9 139 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 CD300LFQ8TDQ1 290 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 SLC25A46Q96AG3 418 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 RNF2Q99496 336 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 TMEM140Q9NV12 185 aa9.44□□□□□ -0.9
LINC00339-203ENST00000420503 KIR2DL5BA0A0G2JN68 375 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 KIR2DL5BA0A0G2JPC4 375 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 METTL21EPA6NDL7 271 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 UBE2CO00762 179 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 HRASP01112 189 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 OR13C7P0DN81 318 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 ATF4P18848 351 aaPredicted RBP9.43□□□□□ -0.9
LINC00339-203ENST00000420503 ELLP55199 621 aaPredicted RBP9.43□□□□□ -0.9
LINC00339-203ENST00000420503 FXYD4P59646 89 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 GNG2P59768 71 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 IDNKQ5T6J7 187 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 ZNF66Q6ZN08 573 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 CROCCP3Q8IVE0 287 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 KIR2DL5AQ8N109 375 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 UBAC2Q8NBM4 344 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 OR5H6Q8NGV6 325 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 OR51H1Q8NH63 302 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 KIR2DL5BQ8NHK3 375 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 GATAD1Q8WUU5 269 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 SLC25A38Q96DW6 304 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 DAZ1Q9NQZ3 744 aaKnown RBP9.43□□□□□ -0.9
LINC00339-203ENST00000420503 NSG2Q9Y328 171 aa9.43□□□□□ -0.9
LINC00339-203ENST00000420503 ABCA13Q86UQ4 5058 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 K7EIM0 57 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 IGHV3-48P01763 117 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 CTXN2P0C2S0 81 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 SLC25A24Q6NUK1 477 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 ZNF818PQ6ZRF7 136 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 GBGT1Q8N5D6 347 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 GDPD1Q8N9F7 314 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 SCARB1Q8WTV0 552 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 QTRT1Q9BXR0 403 aaKnown RBP9.42□□□□□ -0.9
LINC00339-203ENST00000420503 DCSTAMPQ9H295 470 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 ETV7Q9Y603 341 aa9.42□□□□□ -0.9
LINC00339-203ENST00000420503 MUC4Q99102 2169 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 TEX50A0A1B0GTY4 177 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 DBX1A6NMT0 343 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 SLC22A5O76082 557 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 PPYP01298 95 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 TMBIM6P55061 237 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms