RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 PTBP1P26599 531 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTCD1-202ENST00000419981 ERVK-16P61578 105 aa12.92□□□□□ -0.34
PTCD1-202ENST00000419981 GDPD1Q8N9F7 314 aa12.92□□□□□ -0.34
PTCD1-202ENST00000419981 OR10W1Q8NGF6 305 aa12.92□□□□□ -0.34
PTCD1-202ENST00000419981 OR1L6Q8NGR2 347 aa12.92□□□□□ -0.34
PTCD1-202ENST00000419981 ZNF436Q9C0F3 470 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-202ENST00000419981 EHFQ9NZC4 300 aa12.92□□□□□ -0.34
PTCD1-202ENST00000419981 TGOLN2O43493 480 aa12.91□□□□□ -0.34
PTCD1-202ENST00000419981 TMEM127O75204 238 aa12.91□□□□□ -0.34
PTCD1-202ENST00000419981 TRAPPC2P0DI81 140 aa12.91□□□□□ -0.34
PTCD1-202ENST00000419981 TRAPPC2BP0DI82 140 aa12.91□□□□□ -0.34
PTCD1-202ENST00000419981 NEDD8Q15843 81 aa12.91□□□□□ -0.34
PTCD1-202ENST00000419981 HSD17B13Q7Z5P4 300 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-202ENST00000419981 VN1R17PQ8TDU5 208 aa12.91□□□□□ -0.34
PTCD1-202ENST00000419981 OVOL2Q9BRP0 275 aa12.91□□□□□ -0.34
PTCD1-202ENST00000419981 MARCH11A6NNE9 402 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 XRCC3O43542 346 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 RLN1P04808 185 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 SERPINE2P07093 398 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 OR13C7P0DN81 318 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 RPA2P15927 270 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 GNRHRP30968 328 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 SLC25A24Q6NUK1 477 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 SLC38A6Q8IZM9 456 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 OR2C3Q8N628 320 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 OR1L8Q8NGR8 309 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 TMEM190Q8WZ59 177 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
PTCD1-202ENST00000419981 C5orf66Q9H5L9 145 aa12.9□□□□□ -0.34
PTCD1-202ENST00000419981 TEX50A0A1B0GTY4 177 aa12.89□□□□□ -0.35
PTCD1-202ENST00000419981 OR2T8A6NH00 312 aa12.89□□□□□ -0.35
PTCD1-202ENST00000419981 WT1-ASQ06250 92 aa12.89□□□□□ -0.35
PTCD1-202ENST00000419981 CROCCP3Q8IVE0 287 aa12.89□□□□□ -0.35
PTCD1-202ENST00000419981 MOB3AQ96BX8 217 aa12.89□□□□□ -0.35
PTCD1-202ENST00000419981 S100A16Q96FQ6 103 aaKnown RBP12.89□□□□□ -0.35
PTCD1-202ENST00000419981 BSCL2Q96G97 398 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-202ENST00000419981 ZNF2Q9BSG1 426 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-202ENST00000419981 DAZ1Q9NQZ3 744 aaKnown RBP12.89□□□□□ -0.35
PTCD1-202ENST00000419981 F2RP25116 425 aa12.88□□□□□ -0.35
PTCD1-202ENST00000419981 RFX2P48378 723 aa12.88□□□□□ -0.35
PTCD1-202ENST00000419981 APOC4P55056 127 aa12.88□□□□□ -0.35
PTCD1-202ENST00000419981 UBE2NLQ5JXB2 153 aa12.88□□□□□ -0.35
PTCD1-202ENST00000419981 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
PTCD1-202ENST00000419981 DHRS11Q6UWP2 260 aa12.88□□□□□ -0.35
PTCD1-202ENST00000419981 LSM10Q969L4 123 aaKnown RBP12.88□□□□□ -0.35
PTCD1-202ENST00000419981 HINT2Q9BX68 163 aa12.88□□□□□ -0.35
PTCD1-202ENST00000419981 NDUFA4L2Q9NRX3 87 aa12.88□□□□□ -0.35
PTCD1-202ENST00000419981 UBQLN2Q9UHD9 624 aa12.88□□□□□ -0.35
PTCD1-202ENST00000419981 TSPAN4O14817 238 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 PGLYRP1O75594 196 aaPredicted RBP12.87□□□□□ -0.35
PTCD1-202ENST00000419981 LPAR6P43657 344 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 TAS2R46P59540 309 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 CMTM1Q8IZ96 169 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 TSPAN14Q8NG11 270 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 OR5H2Q8NGV7 314 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 FCAMRQ8WWV6 532 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 DGCR14Q96DF8 476 aaKnown RBP12.87□□□□□ -0.35
PTCD1-202ENST00000419981 ATP6V0BQ99437 205 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 C21orf62Q9NYP8 219 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 ANAPC10Q9UM13 185 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 OR51B2Q9Y5P1 312 aa12.87□□□□□ -0.35
PTCD1-202ENST00000419981 F11RQ9Y624 299 aaKnown RBP12.87□□□□□ -0.35
PTCD1-202ENST00000419981 ALMS1Q8TCU4 4167 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 IGHV3-21A0A0B4J1V1 117 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 NDUFA4O00483 81 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 SNAPC5O75971 98 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 KRASP01116 189 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 PMP2P02689 132 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 G6PCP35575 357 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 TGFBR1P36897 503 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 MFAP2P55001 183 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 TAS2R20P59543 309 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 TMEM69Q5SWH9 247 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 WFDC3Q8IUB2 231 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 CADM3Q8N126 398 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 C20orf24Q9BUV8 137 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 FXYD6Q9H0Q3 95 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 NSG2Q9Y328 171 aa12.86□□□□□ -0.35
PTCD1-202ENST00000419981 BIRC6Q9NR09 4857 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 GPR31O00270 319 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 KCTD21Q4G0X4 260 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 Q6ZWC4 215 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 SAMD12Q8N8I0 201 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 UBAC2Q8NBM4 344 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 SCARB1Q8WTV0 552 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 TMEM56Q96MV1 263 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 CHRDL1Q9BU40 450 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 PRNDQ9UKY0 176 aa12.85□□□□□ -0.35
PTCD1-202ENST00000419981 PLECQ15149 4684 aaKnown RBP12.85□□□□□ -0.35
PTCD1-202ENST00000419981 IGHV3OR16-8A0A075B7F1 116 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 A0A0J9YWU9 116 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 CXorf65A6NEN9 183 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 SPRY2O43597 315 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 NAT1P18440 290 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 BMI1P35226 326 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 PMS2P11Q13670 270 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 ODF3L2Q3SX64 289 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms