RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 ECSCRQ19T08 205 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 NSUN5P1Q3KNT7 163 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 TMEM128Q5BJH2 165 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 SSX9Q7RTT3 188 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 LGI3Q8N145 548 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 CENPSQ8N2Z9 138 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 OR1L8Q8NGR8 309 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 OR13C8Q8NGS7 320 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 OR5B3Q8NH48 314 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 DPF1Q92782 380 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 IL22RA2Q969J5 263 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 UBE2E2Q96LR5 201 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 MCRIP2Q9BUT9 160 aaKnown RBP5.3□□□□□ -1.56
LINC02539-202ENST00000419220 SRRQ9GZT4 340 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 NAA60Q9H7X0 242 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 COA4Q9NYJ1 87 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 GPR132Q9UNW8 380 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 VSIG4Q9Y279 399 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 V9GYH0 126 aa5.3□□□□□ -1.56
LINC02539-202ENST00000419220 FAM240BA0A1B0GVZ2 78 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 DUXBA0A1W2PPF3 345 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 MSGN1A6NI15 193 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 UPK2O00526 184 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 ATP6V0E1O15342 81 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 BRI3O95415 125 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 IFNA21P01568 189 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 IFNA17P01571 189 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 IGLV2-14P01704 120 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 OR9G9P0C7N8 305 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 TRAPPC2P0DI81 140 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 TRAPPC2BP0DI82 140 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 CNTFRP26992 372 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 SNCAP37840 140 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 RAB9AP51151 201 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 SLURP1P55000 103 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 RPL30P62888 115 aaKnown RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 RPP30P78346 268 aaKnown RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 EIF4EBP1Q13541 118 aaPredicted RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 KLF9Q13886 244 aaPredicted RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 RNF151Q2KHN1 245 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 OR4A47Q6IF82 309 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 TMED4Q7Z7H5 227 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 ZNF329Q86UD4 541 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 PUSL1Q8N0Z8 303 aaKnown RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 LFNGQ8NES3 379 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 COQ8AQ8NI60 647 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 SRSF12Q8WXF0 261 aaKnown RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 RBPMSQ93062 196 aaKnown RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 NOL4LQ96MY1 436 aaPredicted RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 FYTTD1Q96QD9 318 aaKnown RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 QTRT1Q9BXR0 403 aaKnown RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 FXYD6Q9H0Q3 95 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 ZNF430Q9H8G1 570 aaPredicted RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 TMEM140Q9NV12 185 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 GAR1Q9NY12 217 aaKnown RBP5.29□□□□□ -1.56
LINC02539-202ENST00000419220 ZNF257Q9Y2Q1 563 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 OR51B2Q9Y5P1 312 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 NUBP2Q9Y5Y2 271 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 WSB1Q9Y6I7 421 aa5.29□□□□□ -1.56
LINC02539-202ENST00000419220 CRYM-AS1A6NIL9 109 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 SH2D7A6NKC9 451 aaPredicted RBP5.28□□□□□ -1.56
LINC02539-202ENST00000419220 FAM223BA6NKX1 122 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 SRRM4A7MD48 611 aaKnown RBP5.28□□□□□ -1.56
LINC02539-202ENST00000419220 LYRM1O43325 122 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 RAMP3O60896 148 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 MED6O75586 246 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 S1PR2O95136 353 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 CDS2O95674 445 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 IGLV2-23P01705 113 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 TRGV3P03979 118 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 CRYGBP07316 175 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 OR8U8P0C7N1 319 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 CD28P10747 220 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 IL7P13232 177 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 UCP1P25874 307 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 G6PCP35575 357 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 MYCNOSP40205 109 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 TPPP2P59282 170 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 KRTAP10-2P60368 255 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 RPL23AP62750 156 aaKnown RBP5.28□□□□□ -1.56
LINC02539-202ENST00000419220 ATP5G2Q06055 141 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 ZNF79Q15937 498 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 FAM223AQ8IWN6 122 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 TTC9CQ8N5M4 171 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 C11orf44Q8N8P7 122 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 MINDY2Q8NBR6 621 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 SYT8Q8NBV8 401 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 NECAP1Q8NC96 275 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 KLHL30-AS1Q8NEE0 82 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 OR4D10Q8NGI6 311 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 FAM110DQ8TAY7 271 aaPredicted RBP5.28□□□□□ -1.56
LINC02539-202ENST00000419220 ENKURQ8TC29 256 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 LSM10Q969L4 123 aaKnown RBP5.28□□□□□ -1.56
LINC02539-202ENST00000419220 GALNT14Q96FL9 552 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 RITA1Q96K30 269 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 CXorf58Q96LI9 332 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 CITED2Q99967 270 aaPredicted RBP5.28□□□□□ -1.56
LINC02539-202ENST00000419220 HSPB9Q9BQS6 159 aa5.28□□□□□ -1.56
LINC02539-202ENST00000419220 HINT2Q9BX68 163 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms