RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 POM121L2Q96KW2 1035 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 SCRT2Q9NQ03 307 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 GAGE10A6NGK3 116 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 PRSS47A8MTI9 375 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 OR2J3O76001 311 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 CCNOP22674 350 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 BMI1P35226 326 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 RPL8P62917 257 aaKnown RBP6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 ZXDAP98168 799 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 RBPJQ06330 500 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 WFDC8Q8IUA0 241 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 OR2T6Q8NHC8 308 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 C1orf159Q96HA4 380 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 TAAR6Q96RI8 345 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 SERTAD4Q9NUC0 356 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 GJE1A6NN92 205 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 SYS1-DBNDD2H3BUS1 97 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 IGLV3-19P01714 112 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 GNG3P63215 75 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 GDF5OSQ5U4N7 250 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 PKIBQ9C010 78 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 ZNF835Q9Y2P0 537 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 HCFC1P51610 2035 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 C7orf71A4D174 169 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 C9orf172C9J069 976 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 LMO7DNF2Z398 122 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 DUX1O43812 170 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 SS18L1O75177 396 aaPredicted RBP6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 RHBDL1O75783 438 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 OR2H2O95918 312 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 CA1P00915 261 aaPredicted RBP6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 SPINK2P20155 84 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 COL8A2P25067 703 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 HOXC12P31275 282 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 MRPL49Q13405 166 aaKnown RBP6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 SLC35E4Q6ICL7 350 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 SLC23A3Q6PIS1 610 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 STPG3Q8N7X2 389 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 URB1-AS1Q96HZ7 61 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 IGF2BP2-AS1Q96M15 143 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 CLCF1Q9UBD9 225 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 MED12LQ86YW9 2145 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 C21orf140B9A014 251 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 ZNHIT1O43257 154 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 LGALS7P47929 136 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 PPOXP50336 477 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 GTF2H5Q6ZYL4 71 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 NPVFQ9HCQ7 196 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 SLC25A10Q9UBX3 287 aaPredicted RBP6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 A0A087X0K7 114 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 MGST1P10620 155 aaKnown RBP6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 CCL2P13500 99 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 MFAP2P55001 183 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 NRN1LQ496H8 165 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 FAM168AQ92567 244 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 PROK2Q9HC23 129 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 SH2D2AQ9NP31 389 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 TMEM167BQ9NRX6 74 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 MMP17Q9ULZ9 603 aa6.63□□□□□ -1.35
HMGXB4-202ENST00000418170 C5orf49A4QMS7 147 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 OR9G9P0C7N8 305 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 CCL3P10147 92 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 C5orf17Q8NAS9 161 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 GALMQ96C23 342 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 MBD6Q96DN6 1003 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 TMEM191AQ9H0A3 160 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 PTPRBP23467 1997 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 TET2Q6N021 2002 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 GPR183P32249 361 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 VDAC2P45880 294 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 PSG5Q15238 335 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 FAM162BQ5T6X4 162 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 NEGR1Q7Z3B1 354 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 ZC2HC1AQ96GY0 325 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 HEYLQ9NQ87 328 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 MPC1Q9Y5U8 109 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 LINC00473A8K010 186 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 J3QT63 122 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 NCKAP5O14513 1909 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 GPR6P46095 362 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 SEC11AP67812 179 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 TEPPQ6URK8 271 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 ZNF841Q6ZN19 808 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 MIR17HGQ75NE6 70 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 RLN3Q8WXF3 142 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 TMEM186Q96B77 213 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 OR2V2Q96R30 315 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 CDX2Q99626 313 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 CHRDL1Q9BU40 450 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 MS4A6AQ9H2W1 248 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 SDK2Q58EX2 2172 aa6.62□□□□□ -1.35
HMGXB4-202ENST00000418170 FAM231BA6NCW3 169 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 ANKRD30BLA7E2S9 258 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 GGTLC3B5MD39 225 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 GFRA3O60609 400 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 NGFP01138 241 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 P04436 131 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 FAM53AQ6NSI3 398 aaPredicted RBP6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 C16orf54Q6UWD8 224 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 PRSS57Q6UWY2 283 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms