RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 GPHA2Q96T91 129 aa7.38□□□□□ -1.23
MDC1-202ENST00000416571 MGLLQ99685 303 aa7.38□□□□□ -1.23
MDC1-202ENST00000416571 SRSF8Q9BRL6 282 aaKnown RBP7.38□□□□□ -1.23
MDC1-202ENST00000416571 QTRT1Q9BXR0 403 aaKnown RBP7.38□□□□□ -1.23
MDC1-202ENST00000416571 ANXA10Q9UJ72 324 aa7.38□□□□□ -1.23
MDC1-202ENST00000416571 IGKV3-7A0A075B6H7 116 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 IGHV3OR16-8A0A075B7F1 116 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 TRAV1-2A0A0B4J238 106 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 TMEM235A6NFC5 223 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 IGLL5B9A064 214 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 K7EMT4 169 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 UPK2O00526 184 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 EBAG9O00559 213 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 CASQ2O14958 399 aaPredicted RBP7.37□□□□□ -1.23
MDC1-202ENST00000416571 ZNF207O43670 478 aaKnown RBP7.37□□□□□ -1.23
MDC1-202ENST00000416571 MRPS14O60783 128 aaKnown RBP7.37□□□□□ -1.23
MDC1-202ENST00000416571 SCGNO76038 276 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 HPRT1P00492 218 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 OR13C7P0DN81 318 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 ADMP35318 185 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 TFPI2P48307 235 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 TAS2R31P59538 309 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 EIF4EBP1Q13541 118 aaPredicted RBP7.37□□□□□ -1.23
MDC1-202ENST00000416571 Q56UQ5 140 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 OGFRL1Q5TC84 451 aaPredicted RBP7.37□□□□□ -1.23
MDC1-202ENST00000416571 CENPSQ8N2Z9 138 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 ZBTB34Q8NCN2 500 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 OR10W1Q8NGF6 305 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 CMTM3Q96MX0 182 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 ATP6V0BQ99437 205 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 CCL28Q9NRJ3 127 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 C21orf62Q9NYP8 219 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 DNAH10Q8IVF4 4471 aa7.37□□□□□ -1.23
MDC1-202ENST00000416571 IGHV3-21A0A0B4J1V1 117 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 TRAV3A0A0B4J244 114 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 C15orf62A8K5M9 175 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 C11orf94C9JXX5 98 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 SULT1C2O00338 296 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 DEFB4AO15263 64 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 RBFOX2O43251 390 aaKnown RBP eCLIP7.36□□□□□ -1.23
MDC1-202ENST00000416571 XRCC3O43542 346 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 CA1P00915 261 aaPredicted RBP7.36□□□□□ -1.23
MDC1-202ENST00000416571 SERPINE2P07093 398 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 TRAPPC2P0DI81 140 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 TRAPPC2BP0DI82 140 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 ERVK-16P61578 105 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 TMEM187Q14656 261 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 ZNF124Q15973 351 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 LINC00336Q6ZUF6 198 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 OR13F1Q8NGS4 319 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 RNF2Q99496 336 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 CHRDL1Q9BU40 450 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 HINT2Q9BX68 163 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 DUSP21Q9H596 190 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 TMEM140Q9NV12 185 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 SMPXQ9UHP9 88 aa7.36□□□□□ -1.23
MDC1-202ENST00000416571 IGHV7-4-1A0A0J9YVY3 117 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 NUPL2O15504 423 aaKnown RBP7.35□□□□□ -1.23
MDC1-202ENST00000416571 YIF1AO95070 293 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 PPYP01298 95 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 EIF4EP06730 217 aaKnown RBP7.35□□□□□ -1.23
MDC1-202ENST00000416571 FCGR2CP31995 323 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 MFAP2P55001 183 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 FXYD4P59646 89 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 PAFAH1B2P68402 229 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 RELQ04864 619 aaPredicted RBP7.35□□□□□ -1.23
MDC1-202ENST00000416571 WT1-ASQ06250 92 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 MSMO1Q15800 293 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 POU2AF1Q16633 256 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 AADACL3Q5VUY0 350 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 PRSS48Q7RTY5 328 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 NR2C2APQ86WQ0 139 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 TMEM116Q8NCL8 245 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 BEST4Q8NFU0 473 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 OR1L8Q8NGR8 309 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 OR51H1Q8NH63 302 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 SCARB1Q8WTV0 552 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 RHPN1-AS1Q9BWJ2 59 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 SLC5A7Q9GZV3 580 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 APLNQ9ULZ1 77 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 ETV7Q9Y603 341 aa7.35□□□□□ -1.23
MDC1-202ENST00000416571 F11RQ9Y624 299 aaKnown RBP7.35□□□□□ -1.23
MDC1-202ENST00000416571 IGHV3-49A0A0A0MS15 119 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 TEX50A0A1B0GTY4 177 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 SMIM30A4D0T7 59 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 FGF2P09038 288 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 C22orf42Q6IC83 251 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 ZNF367Q7RTV3 350 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 GBGT1Q8N5D6 347 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 GVQW1Q8N7I0 195 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 LSM10Q969L4 123 aaKnown RBP7.34□□□□□ -1.23
MDC1-202ENST00000416571 PLEKHA2Q9HB19 425 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 COMMD9Q9P000 198 aa7.34□□□□□ -1.23
MDC1-202ENST00000416571 MUC4Q99102 2169 aa7.33□□□□□ -1.24
MDC1-202ENST00000416571 TRDV1A0A1B0GX56 115 aa7.33□□□□□ -1.24
MDC1-202ENST00000416571 MARCH11A6NNE9 402 aa7.33□□□□□ -1.24
MDC1-202ENST00000416571 DNASE2O00115 360 aaPredicted RBP7.33□□□□□ -1.24
MDC1-202ENST00000416571 CHEK1O14757 476 aa7.33□□□□□ -1.24
MDC1-202ENST00000416571 SSX5O60225 188 aa7.33□□□□□ -1.24
MDC1-202ENST00000416571 CD5P06127 495 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms