RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 RHBDL2Q9NX52 303 aa14.33□□□□□ -0.12
UBXN4-202ENST00000415164 TRAV18A0A075B6X5 111 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 OR4C46A6NHA9 309 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 TSPAN4O14817 238 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 S1PR2O95136 353 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 KLK9Q2XQG4 91 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 ODF3L2Q3SX64 289 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 IZUMO2Q6UXV1 221 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 ZBTB34Q8NCN2 500 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 PHLDA1Q8WV24 401 aaPredicted RBP14.32□□□□□ -0.12
UBXN4-202ENST00000415164 RNF183Q96D59 192 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 KRTAP17-1Q9BYP8 105 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 KLK9Q9UKQ9 250 aa14.32□□□□□ -0.12
UBXN4-202ENST00000415164 TRAPPC2P0DI81 140 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 TRAPPC2BP0DI82 140 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 FCGR2BP31994 310 aaPredicted RBP14.31□□□□□ -0.12
UBXN4-202ENST00000415164 TFPI2P48307 235 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 ERVK-16P61578 105 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 MXD1Q05195 221 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 Q56UQ5 140 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 SFXN4Q6P4A7 337 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 APRG1Q8IVJ8 170 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 GDPD1Q8N9F7 314 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 VN1R17PQ8TDU5 208 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 BSCL2Q96G97 398 aaPredicted RBP14.31□□□□□ -0.12
UBXN4-202ENST00000415164 VCX3BQ9H321 246 aa14.31□□□□□ -0.12
UBXN4-202ENST00000415164 IGKV3-7A0A075B6H7 116 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 KIR2DL5BA0A0G2JN68 375 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 KIR2DL5BA0A0G2JPC4 375 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 MEIS3P1A6NDR6 274 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 CTSDP07339 412 aaPredicted RBP14.3□□□□□ -0.12
UBXN4-202ENST00000415164 HERV-K104P61576 105 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 ZNF818PQ6ZRF7 136 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 KIR2DL5AQ8N109 375 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 KIR2DL5BQ8NHK3 375 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 GALNT14Q96FL9 552 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 CHRDL1Q9BU40 450 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 C6orf62Q9GZU0 229 aaPredicted RBP14.3□□□□□ -0.12
UBXN4-202ENST00000415164 SSR3Q9UNL2 185 aa14.3□□□□□ -0.12
UBXN4-202ENST00000415164 NDUFA4O00483 81 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 RBFOX2O43251 390 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBXN4-202ENST00000415164 SERPINE2P07093 398 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 MSMO1Q15800 293 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 ZNF773Q6PK81 442 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 HOGA1Q86XE5 327 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 OR5H6Q8NGV6 325 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 CD300LFQ8TDQ1 290 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 SRSF8Q9BRL6 282 aaKnown RBP14.29□□□□□ -0.12
UBXN4-202ENST00000415164 C21orf62Q9NYP8 219 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 FBXL17Q9UF56 701 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 NSG2Q9Y328 171 aa14.29□□□□□ -0.12
UBXN4-202ENST00000415164 IGHV3-49A0A0A0MS15 119 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 TEX50A0A1B0GTY4 177 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 CLEC2LP0C7M8 214 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 WT1-ASQ06250 92 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 ZNF124Q15973 351 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 IDNKQ5T6J7 187 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 SPSB3Q6PJ21 355 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 TPRA1Q86W33 373 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 TSPAN14Q8NG11 270 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 OR1L8Q8NGR8 309 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 MAP6D1Q9H9H5 199 aa14.28□□□□□ -0.12
UBXN4-202ENST00000415164 YIF1AO95070 293 aa14.27□□□□□ -0.13
UBXN4-202ENST00000415164 RLN1P04808 185 aa14.27□□□□□ -0.13
UBXN4-202ENST00000415164 FGF9P31371 208 aaPredicted RBP14.27□□□□□ -0.13
UBXN4-202ENST00000415164 SDC2P34741 201 aa14.27□□□□□ -0.13
UBXN4-202ENST00000415164 HSPA13P48723 471 aa14.27□□□□□ -0.13
UBXN4-202ENST00000415164 POU2AF1Q16633 256 aa14.27□□□□□ -0.13
UBXN4-202ENST00000415164 THOC7Q6I9Y2 204 aaKnown RBP14.27□□□□□ -0.13
UBXN4-202ENST00000415164 LSM10Q969L4 123 aaKnown RBP14.27□□□□□ -0.13
UBXN4-202ENST00000415164 PLEKHA2Q9HB19 425 aa14.27□□□□□ -0.13
UBXN4-202ENST00000415164 COMMD9Q9P000 198 aa14.27□□□□□ -0.13
UBXN4-202ENST00000415164 HERC2O95714 4834 aa14.26□□□□□ -0.13
UBXN4-202ENST00000415164 MARCH11A6NNE9 402 aa14.26□□□□□ -0.13
UBXN4-202ENST00000415164 NANOS2P60321 138 aaKnown RBP14.26□□□□□ -0.13
UBXN4-202ENST00000415164 UBE2UQ5VVX9 321 aa14.26□□□□□ -0.13
UBXN4-202ENST00000415164 HSD17B13Q7Z5P4 300 aaPredicted RBP14.26□□□□□ -0.13
UBXN4-202ENST00000415164 SCARB1Q8WTV0 552 aa14.26□□□□□ -0.13
UBXN4-202ENST00000415164 SLC25A38Q96DW6 304 aa14.26□□□□□ -0.13
UBXN4-202ENST00000415164 RNF2Q99496 336 aa14.26□□□□□ -0.13
UBXN4-202ENST00000415164 RARRES2Q99969 163 aa14.26□□□□□ -0.13
UBXN4-202ENST00000415164 IFT46Q9NQC8 304 aa14.26□□□□□ -0.13
UBXN4-202ENST00000415164 OR51B2Q9Y5P1 312 aa14.26□□□□□ -0.13
UBXN4-202ENST00000415164 F11RQ9Y624 299 aaKnown RBP14.26□□□□□ -0.13
UBXN4-202ENST00000415164 IGHV3OR16-13A0A075B7E8 117 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 IGHV3-74A0A0B4J1X5 117 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 SNAPC5O75971 98 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 KRASP01116 189 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 LPAR6P43657 344 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 MFAP2P55001 183 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 GABARAPL2P60520 117 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 GBGT1Q8N5D6 347 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 OR5AP2Q8NGF4 316 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 CSTL1Q9H114 145 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 RNF167Q9H6Y7 350 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 DIABLOQ9NR28 239 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 EHFQ9NZC4 300 aa14.25□□□□□ -0.13
UBXN4-202ENST00000415164 LOC100506127A0A0U1RQW1 187 aa14.24□□□□□ -0.13
UBXN4-202ENST00000415164 MPTX1A8MV57 137 aa14.24□□□□□ -0.13
UBXN4-202ENST00000415164 IFNA4P05014 189 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms