RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TET2Q6N021 2002 aaPredicted RBP11.07□□□□□ -0.64
LIMS1-205ENST00000410093 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 H0YJW9 148 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 LGALS7P47929 136 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 CDC34P49427 236 aaPredicted RBP11.07□□□□□ -0.64
LIMS1-205ENST00000410093 RAB5BP61020 215 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 TFF3Q07654 80 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 TEPPQ6URK8 271 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 TREML4Q6UXN2 200 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 C8orf46Q8TAG6 207 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 NEU4Q8WWR8 484 aaPredicted RBP11.07□□□□□ -0.64
LIMS1-205ENST00000410093 RAB24Q969Q5 203 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 MALSU1Q96EH3 234 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 C19orf24Q9BVV8 132 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 MIOXQ9UGB7 285 aa11.07□□□□□ -0.64
LIMS1-205ENST00000410093 LSM4Q9Y4Z0 139 aaKnown RBP11.07□□□□□ -0.64
LIMS1-205ENST00000410093 TRAV3A0A0B4J244 114 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 A0A1W2PPV4 95 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 RRHO14718 337 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 IGHV1-8P0DP01 117 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 CCL3L1P16619 93 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
LIMS1-205ENST00000410093 ERHP84090 104 aaKnown RBP11.06□□□□□ -0.64
LIMS1-205ENST00000410093 ADORA2A-AS1P86434 159 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 LYPD2Q6UXB3 125 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 LINC01560Q8TB33 94 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 TMEM167AQ8TBQ9 72 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 ITLN2Q8WWU7 325 aaPredicted RBP11.06□□□□□ -0.64
LIMS1-205ENST00000410093 CACNG8Q8WXS5 425 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 ST6GALNAC6Q969X2 333 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 NABP2Q9BQ15 211 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 COMMD5Q9GZQ3 224 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 CTDSP1Q9GZU7 261 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 TMEM133Q9H2Q1 129 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 CTSZQ9UBR2 303 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 AMMECR1Q9Y4X0 333 aaPredicted RBP11.06□□□□□ -0.64
LIMS1-205ENST00000410093 KLF2Q9Y5W3 355 aaPredicted RBP11.06□□□□□ -0.64
LIMS1-205ENST00000410093 DOPEY1Q5JWR5 2465 aa11.06□□□□□ -0.64
LIMS1-205ENST00000410093 C1orf196B1AJZ1 125 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 OR2C1O95371 312 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 IGKV1D-33P01593 117 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 IGKV1-33P01594 117 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 IGHV2-70P01814 119 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 AGAP20933 346 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 GPX4P36969 197 aaPredicted RBP11.05□□□□□ -0.64
LIMS1-205ENST00000410093 SUB1P53999 127 aaKnown RBP eCLIP11.05□□□□□ -0.645e-7■■■■■ 33
LIMS1-205ENST00000410093 RPL8P62917 257 aaKnown RBP11.05□□□□□ -0.64
LIMS1-205ENST00000410093 SSX2Q16385 188 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 BSXQ3C1V8 233 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 SPINK9Q5DT21 86 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 FAM90A2PQ658T7 463 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 TGIF2LXQ8IUE1 241 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 ABHD12Q8N2K0 398 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 Q8N7P7 452 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 BEND2Q8NDZ0 799 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 NEUROG1Q92886 237 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 TIMD4Q96H15 378 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 MRPL20Q9BYC9 149 aaKnown RBP11.05□□□□□ -0.64
LIMS1-205ENST00000410093 BIN3Q9NQY0 253 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 CBLN4Q9NTU7 201 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 PCNX1Q96RV3 2341 aa11.05□□□□□ -0.64
LIMS1-205ENST00000410093 TEX50A0A1B0GTY4 177 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 TGOLN2O43493 480 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 PDE6DO43924 150 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 MT-CO2P00403 227 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 CA2P00918 260 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 CRYBA1P05813 215 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 HNF4GQ14541 408 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 VMA21Q3ZAQ7 101 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 UTF1Q5T230 341 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 SSX7Q7RTT5 188 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 C1QL4Q86Z23 238 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 HIST1H2BAQ96A08 127 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 SLC35E1Q96K37 410 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 RNF5Q99942 180 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 GGTLC1Q9BX51 225 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 NAT8Q9UHE5 227 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 ARL2-SNX15V9GYD0 113 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 F6UZH7 168 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 FCN3O75636 299 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 CXorf1O96002 111 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 IGKV1-16P04430 117 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 SAA1P0DJI8 122 aaPredicted RBP11.04□□□□□ -0.64
LIMS1-205ENST00000410093 FGF8P55075 233 aaPredicted RBP11.04□□□□□ -0.64
LIMS1-205ENST00000410093 RHOBP62745 196 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 AKIRIN2Q53H80 203 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 PNKDQ8N490 385 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 OR8B3Q8NGG8 313 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 OR8B2Q96RD0 313 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 SLC25A22Q9H936 323 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 SDF2L1Q9HCN8 221 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 NDUFA4L2Q9NRX3 87 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 PXMP4Q9Y6I8 212 aa11.04□□□□□ -0.64
LIMS1-205ENST00000410093 ZNF727A8MUV8 499 aa11.03□□□□□ -0.64
LIMS1-205ENST00000410093 VENTXO95231 258 aa11.03□□□□□ -0.64
LIMS1-205ENST00000410093 COX6B1P14854 86 aa11.03□□□□□ -0.64
LIMS1-205ENST00000410093 RAB5AP20339 215 aa11.03□□□□□ -0.64
LIMS1-205ENST00000410093 HLA-DRB5Q30154 266 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms