RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 HIST1H2BNQ99877 126 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 HIST1H2BMQ99879 126 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 EFCAB11Q9BUY7 163 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 MND1Q9BWT6 205 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 RSPO3Q9BXY4 272 aaPredicted RBP3.02□□□□□ -1.93
LSM5-205ENST00000409952 NEO1Q92859 1461 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 IGKV1D-37A0A075B6S9 117 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 TMEM269A0A1B0GVZ9 245 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 GRIFINA4D1Z8 144 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 RIIAD1A6NNX1 92 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 C17orf51A8MQB3 221 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 J3QRK9 145 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 PRM2P04554 102 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 OR10J4P0C629 311 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 BLVRBP30043 206 aaPredicted RBP3.01□□□□□ -1.93
LSM5-205ENST00000409952 PSMD8P48556 350 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 RBM11P57052 281 aaKnown RBP3.01□□□□□ -1.93
LSM5-205ENST00000409952 FLI1Q01543 452 aaPredicted RBP3.01□□□□□ -1.93
LSM5-205ENST00000409952 DHRS2Q13268 280 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 ZNF322Q6U7Q0 402 aaPredicted RBP3.01□□□□□ -1.93
LSM5-205ENST00000409952 SDIM1Q6ZPB5 146 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 OR10D4PQ8NGN7 298 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 ZNF675Q8TD23 568 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 H1FXQ92522 213 aaKnown RBP3.01□□□□□ -1.93
LSM5-205ENST00000409952 CCDC32Q9BV29 185 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 IMUPQ9GZP8 106 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 FAM107BQ9H098 131 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 FUT9Q9Y231 359 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 ZNF835Q9Y2P0 537 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 AMMECR1Q9Y4X0 333 aaPredicted RBP3.01□□□□□ -1.93
LSM5-205ENST00000409952 SMAD5-AS1Q9Y6J3 95 aa3.01□□□□□ -1.93
LSM5-205ENST00000409952 NUP214P35658 2090 aaPredicted RBP3□□□□□ -1.93
LSM5-205ENST00000409952 ITGB4P16144 1822 aa3□□□□□ -1.93
LSM5-205ENST00000409952 IGLV3-16A0A075B6K0 115 aa3□□□□□ -1.93
LSM5-205ENST00000409952 IGHV3OR16-8A0A075B7F1 116 aa3□□□□□ -1.93
LSM5-205ENST00000409952 IGKV1D-43A0A0B4J1Z2 117 aa3□□□□□ -1.93
LSM5-205ENST00000409952 PIAS1O75925 651 aa3□□□□□ -1.93
LSM5-205ENST00000409952 OR2J2O76002 312 aa3□□□□□ -1.93
LSM5-205ENST00000409952 LY6HO94772 140 aa3□□□□□ -1.93
LSM5-205ENST00000409952 IGKV1-5P01602 117 aa3□□□□□ -1.93
LSM5-205ENST00000409952 IGHV1-69P01742 117 aa3□□□□□ -1.93
LSM5-205ENST00000409952 APOA2P02652 100 aa3□□□□□ -1.93
LSM5-205ENST00000409952 CSN2P05814 226 aa3□□□□□ -1.93
LSM5-205ENST00000409952 CRHBPP24387 322 aa3□□□□□ -1.93
LSM5-205ENST00000409952 GTF2A1P52655 376 aaPredicted RBP3□□□□□ -1.93
LSM5-205ENST00000409952 PIGPP57054 158 aa3□□□□□ -1.93
LSM5-205ENST00000409952 TAS2R30P59541 319 aa3□□□□□ -1.93
LSM5-205ENST00000409952 LYRM7Q5U5X0 104 aa3□□□□□ -1.93
LSM5-205ENST00000409952 DHFR2Q86XF0 187 aa3□□□□□ -1.93
LSM5-205ENST00000409952 NUP35Q8NFH5 326 aa3□□□□□ -1.93
LSM5-205ENST00000409952 SMDT1Q9H4I9 107 aa3□□□□□ -1.93
LSM5-205ENST00000409952 RNF122Q9H9V4 155 aa3□□□□□ -1.93
LSM5-205ENST00000409952 XAGE1AQ9HD64 81 aa3□□□□□ -1.93
LSM5-205ENST00000409952 IL36BQ9NZH7 164 aa3□□□□□ -1.93
LSM5-205ENST00000409952 TP73-AS1Q9UF72 201 aa3□□□□□ -1.93
LSM5-205ENST00000409952 OR52A1Q9UKL2 312 aa3□□□□□ -1.93
LSM5-205ENST00000409952 ZNF443Q9Y2A4 671 aaPredicted RBP3□□□□□ -1.93
LSM5-205ENST00000409952 CFAP43Q8NDM7 1665 aa3□□□□□ -1.93
LSM5-205ENST00000409952 KIAA1671Q9BY89 1806 aa3□□□□□ -1.93
LSM5-205ENST00000409952 SVILO95425 2214 aa3□□□□□ -1.93
LSM5-205ENST00000409952 ARHGEF10O15013 1369 aa3□□□□□ -1.93
LSM5-205ENST00000409952 PTPRJQ12913 1337 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 GAPVD1Q14C86 1478 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 IGLV3-12A0A075B6K2 115 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 TRAV38-1A0A0B4J264 116 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 M0QZK8 103 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 BANF1O75531 89 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 KRTAP1-4P0C5Y4 121 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 GZMHP20718 246 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 FXYD7P58549 80 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 RPS11P62280 158 aaKnown RBP eCLIP2.99□□□□□ -1.93
LSM5-205ENST00000409952 LTC4SQ16873 150 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 LGALSLQ3ZCW2 172 aaPredicted RBP2.99□□□□□ -1.93
LSM5-205ENST00000409952 AADACL3Q5VUY0 350 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 ZFAND6Q6FIF0 208 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 CNEP1R1Q8N9A8 125 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 Q8N9L7 120 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 ST6GALNAC3Q8NDV1 305 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 MUC7Q8TAX7 377 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 MBD3L1Q8WWY6 194 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 DERL1Q9BUN8 251 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 ANAPC11Q9NYG5 84 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 MED11Q9P086 117 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 MCTS1Q9ULC4 181 aaKnown RBP2.99□□□□□ -1.93
LSM5-205ENST00000409952 FMN1Q68DA7 1419 aa2.99□□□□□ -1.93
LSM5-205ENST00000409952 PLA2R1Q13018 1463 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 AGRNO00468 2067 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 IGHV3-73A0A0B4J1V6 119 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 TRAV41A0A0B4J266 112 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 DUXBA0A1W2PPF3 345 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 C19orf71A6NCJ1 209 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 CASP1P29466 404 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 ZNF80P51504 273 aaPredicted RBP2.98□□□□□ -1.93
LSM5-205ENST00000409952 EMP1P54849 157 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 KLF3P57682 345 aaPredicted RBP2.98□□□□□ -1.93
LSM5-205ENST00000409952 AKR1C1Q04828 323 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 KPRPQ5T749 579 aaPredicted RBP2.98□□□□□ -1.93
LSM5-205ENST00000409952 LCA10Q71F78 164 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 TCF24Q7RTU0 167 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms