RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ZNF841Q6ZN19 808 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 TGIF2LXQ8IUE1 241 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 ABHD12Q8N2K0 398 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 BEND2Q8NDZ0 799 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 HARBI1Q96MB7 349 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 NABP2Q9BQ15 211 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 MRPL20Q9BYC9 149 aaKnown RBP6.09□□□□□ -1.44
CXCR4-202ENST00000409817 MAP1LC3BQ9GZQ8 125 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 TUBA4BQ9H853 241 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 NPVFQ9HCQ7 196 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 SMCO4Q9NRQ5 59 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 LAMA5O15230 3695 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 DSPP15924 2871 aaKnown RBP6.08□□□□□ -1.44
CXCR4-202ENST00000409817 A0A1W2PN81 502 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 MED19A0JLT2 244 aaPredicted RBP6.08□□□□□ -1.44
CXCR4-202ENST00000409817 FAM74A7A6NL05 159 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 GOSR1O95249 250 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 IGKV1-16P04430 117 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 IFNA4P05014 189 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 SRP19P09132 144 aaKnown RBP6.08□□□□□ -1.44
CXCR4-202ENST00000409817 SAA1P0DJI8 122 aaPredicted RBP6.08□□□□□ -1.44
CXCR4-202ENST00000409817 CHRNA7P36544 502 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 OPRK1P41145 380 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 ICAM4Q14773 271 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 ZNF726P1Q15940 193 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 FAM74A3Q4VXF1 159 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 SPINK9Q5DT21 86 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 FFAR4Q5NUL3 377 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 RPP25LQ8N5L8 163 aaKnown RBP6.08□□□□□ -1.44
CXCR4-202ENST00000409817 C11orf42Q8N5U0 333 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 OR10G9Q8NGN4 311 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 OR10G7Q8NGN6 311 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 TMEM167AQ8TBQ9 72 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 VAX2Q9UIW0 290 aa6.08□□□□□ -1.44
CXCR4-202ENST00000409817 AMMECR1Q9Y4X0 333 aaPredicted RBP6.08□□□□□ -1.44
CXCR4-202ENST00000409817 A0A1B0GV50 99 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 SEC14L6B5MCN3 397 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 RRHO14718 337 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 IGLV1-47P01700 117 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 LIPFP07098 398 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 ELLP55199 621 aaPredicted RBP6.07□□□□□ -1.44
CXCR4-202ENST00000409817 RPL8P62917 257 aaKnown RBP6.07□□□□□ -1.44
CXCR4-202ENST00000409817 HAGHQ16775 308 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 HLA-DRB5Q30154 266 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 BSXQ3C1V8 233 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 VMA21Q3ZAQ7 101 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 C2orf83Q53S99 150 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 WDR25Q64LD2 544 aaPredicted RBP6.07□□□□□ -1.44
CXCR4-202ENST00000409817 ACSM6Q6P461 480 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 LCN15Q6UWW0 184 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 LY6G5BQ8NDX9 201 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 OR1L8Q8NGR8 309 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 RARRES2Q99969 163 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 CLEC7AQ9BXN2 247 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 COMMD5Q9GZQ3 224 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 VSIRQ9H7M9 311 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 CHODLQ9H9P2 273 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 MANBALQ9NQG1 85 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 GNG13Q9P2W3 67 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 LSM4Q9Y4Z0 139 aaKnown RBP6.07□□□□□ -1.44
CXCR4-202ENST00000409817 SPTBN4Q9H254 2564 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 IGHV2-26A0A0B4J1V2 119 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 PPIAL4CA0A0B4J2A2 164 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 TEX50A0A1B0GTY4 177 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 SRRM4A7MD48 611 aaKnown RBP6.07□□□□□ -1.44
CXCR4-202ENST00000409817 NUPL2O15504 423 aaKnown RBP6.07□□□□□ -1.44
CXCR4-202ENST00000409817 PPIAL4GP0DN37 164 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 PSMB3P49720 205 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 RPS16P62249 146 aaKnown RBP6.07□□□□□ -1.44
CXCR4-202ENST00000409817 ERHP84090 104 aaKnown RBP6.07□□□□□ -1.44
CXCR4-202ENST00000409817 PNRC1Q12796 327 aaPredicted RBP6.07□□□□□ -1.44
CXCR4-202ENST00000409817 AWAT1Q58HT5 328 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 SLC35E3Q7Z769 313 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 C15orf54Q8N8G6 183 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 CACNG8Q8WXS5 425 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 RNF5Q99942 180 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 NIPSNAP3BQ9BS92 247 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 NDUFA4L2Q9NRX3 87 aa6.07□□□□□ -1.44
CXCR4-202ENST00000409817 ATMQ13315 3056 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 PIEZO1Q92508 2521 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 SMCO3A2RU48 225 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 C7orf77A4D0Y5 90 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 B4DEV8 164 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 TMEM250H0YL14 139 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 M0R036 132 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 M0R1W7 72 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 CA2P00918 260 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 IGKV1D-33P01593 117 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 IGKV1-33P01594 117 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 OR13C7P0DN81 318 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 CDC34P49427 236 aaPredicted RBP6.06□□□□□ -1.44
CXCR4-202ENST00000409817 SUB1P53999 127 aaKnown RBP eCLIP6.06□□□□□ -1.44
CXCR4-202ENST00000409817 TMEM88Q6PEY1 159 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 Q8N7P7 452 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 TEX45Q8NA69 505 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 RXFP4Q8TDU9 374 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 TMEM170AQ8WVE7 144 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 ITLN2Q8WWU7 325 aaPredicted RBP6.06□□□□□ -1.44
CXCR4-202ENST00000409817 RAB24Q969Q5 203 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 TXNDC17Q9BRA2 123 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms