RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CA7P43166 264 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 DUX3Q96PT4 197 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 NPCDR1Q9BY65 106 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 SAMD13Q5VXD3 122 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 SAA2-SAA4A0A096LPE2 208 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 EIF3GO75821 320 aaKnown RBP eCLIP21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 STAG3L2P0CL84 134 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 SAA2P0DJI9 122 aaPredicted RBP21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 IFT22Q9H7X7 185 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 PLSCR4Q9NRQ2 329 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 NBEAP1P0C6P0 100 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 DANCRP0C864 163 aa21.02■□□□□ 0.96
SPIRE1-202ENST00000409402 H7C1H1 209 aa21.01■□□□□ 0.95
SPIRE1-202ENST00000409402 RARRES2Q99969 163 aa21.01■□□□□ 0.95
SPIRE1-202ENST00000409402 MESP1Q9BRJ9 268 aa21.01■□□□□ 0.95
SPIRE1-202ENST00000409402 ASIPP42127 132 aa21.01■□□□□ 0.95
SPIRE1-202ENST00000409402 TCTAP57738 103 aa21.01■□□□□ 0.95
SPIRE1-202ENST00000409402 C2orf68Q2NKX9 166 aa21.01■□□□□ 0.95
SPIRE1-202ENST00000409402 IGFBP2P18065 325 aa21■□□□□ 0.95
SPIRE1-202ENST00000409402 CACNG8Q8WXS5 425 aa21■□□□□ 0.95
SPIRE1-202ENST00000409402 MRPL18Q9H0U6 180 aaKnown RBP21■□□□□ 0.95
SPIRE1-202ENST00000409402 IGHV1-46P01743 117 aa21■□□□□ 0.95
SPIRE1-202ENST00000409402 NMBP08949 121 aa21■□□□□ 0.95
SPIRE1-202ENST00000409402 PAPPA-AS1Q5QFB9 102 aa21■□□□□ 0.95
SPIRE1-202ENST00000409402 SAA1P0DJI8 122 aaPredicted RBP21■□□□□ 0.95
SPIRE1-202ENST00000409402 C20orf204Q6ZNR8 217 aa21■□□□□ 0.95
SPIRE1-202ENST00000409402 IGFBP3P17936 291 aaPredicted RBP21■□□□□ 0.95
SPIRE1-202ENST00000409402 ADIPOQQ15848 244 aa21■□□□□ 0.95
SPIRE1-202ENST00000409402 HLA-DRB1P01911 266 aa21■□□□□ 0.95
SPIRE1-202ENST00000409402 AGAP20933 346 aa21■□□□□ 0.95
SPIRE1-202ENST00000409402 SCN2AQ99250 2005 aa20.99■□□□□ 0.95
SPIRE1-202ENST00000409402 NPIPB7O75200 414 aa20.99■□□□□ 0.95
SPIRE1-202ENST00000409402 EFNA4P52798 201 aa20.99■□□□□ 0.95
SPIRE1-202ENST00000409402 TMEM238LA0A1B0GVL6 79 aa20.99■□□□□ 0.95
SPIRE1-202ENST00000409402 A6NJY4 79 aa20.99■□□□□ 0.95
SPIRE1-202ENST00000409402 H3BVH4 76 aa20.99■□□□□ 0.95
SPIRE1-202ENST00000409402 PAM16Q9Y3D7 125 aa20.99■□□□□ 0.95
SPIRE1-202ENST00000409402 WFIKKN1Q96NZ8 548 aa20.99■□□□□ 0.95
SPIRE1-202ENST00000409402 GEMIN7Q9H840 131 aaKnown RBP20.99■□□□□ 0.95
SPIRE1-202ENST00000409402 LGALS3P17931 250 aaKnown RBP20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 PRB3Q04118 309 aaPredicted RBP20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 FAM186AA6NE01 2351 aa20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 COPS9Q8WXC6 57 aa20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 TRBV6-7A0A0A0MS04 114 aa20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 PARLQ9H300 379 aa20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 OTOFQ9HC10 1997 aa20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 LINC00271P0C7V0 271 aa20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 CIRBPQ14011 172 aaKnown RBP20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 LYZL4Q96KX0 146 aa20.98■□□□□ 0.95
SPIRE1-202ENST00000409402 LINC01587Q99440 93 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 TNFRSF18Q9Y5U5 241 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 LCTP09848 1927 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 TRAV20A0A0B4J274 112 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 TRAV40A0A0B4J280 105 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 LEPROTL1O95214 131 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 GPX4P36969 197 aaPredicted RBP20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 CENPWQ5EE01 88 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 TMEM101Q96IK0 257 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 COL25A1Q9BXS0 654 aaPredicted RBP20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 UPK2O00526 184 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 CCL1P22362 96 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 ZNF672Q499Z4 452 aaPredicted RBP20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 ZNF497Q6ZNH5 498 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 TRBV20OR9-2A0A075B6H5 130 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 GGNQ86UU5 652 aa20.97■□□□□ 0.95
SPIRE1-202ENST00000409402 MORN2Q502X0 79 aa20.96■□□□□ 0.95
SPIRE1-202ENST00000409402 TCRBV4S1A1TA0A5B7 111 aa20.96■□□□□ 0.95
SPIRE1-202ENST00000409402 FAM209BQ5JX69 171 aa20.96■□□□□ 0.95
SPIRE1-202ENST00000409402 C8orf46Q8TAG6 207 aa20.96■□□□□ 0.95
SPIRE1-202ENST00000409402 PIKFYVEQ9Y2I7 2098 aa20.96■□□□□ 0.95
SPIRE1-202ENST00000409402 OR52E5Q8NH55 327 aa20.96■□□□□ 0.95
SPIRE1-202ENST00000409402 HSPB9Q9BQS6 159 aa20.96■□□□□ 0.95
SPIRE1-202ENST00000409402 COX6CP09669 75 aa20.96■□□□□ 0.95
SPIRE1-202ENST00000409402 KLK15Q9H2R5 256 aa20.96■□□□□ 0.95
SPIRE1-202ENST00000409402 IGHV3OR16-8A0A075B7F1 116 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 DMRTA2Q96SC8 542 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 SHISA3A0PJX4 238 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 RBFOX2O43251 390 aaKnown RBP eCLIP20.95■□□□□ 0.946e-8■■■■□ 21.8
SPIRE1-202ENST00000409402 RPRMQ9NS64 109 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 MSRB2Q9Y3D2 182 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 WNT2P09544 360 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 ST6GALNAC3Q8NDV1 305 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 SFRP2Q96HF1 295 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 SPTBP11277 2137 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 A0A087X0M5 115 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 A0A1B0GX30 115 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 LYPD3O95274 346 aa20.95■□□□□ 0.94
SPIRE1-202ENST00000409402 TRAV24A0A0B4J272 114 aa20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 RPL24P83731 157 aaKnown RBP20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 MEIG1Q5JSS6 88 aa20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 SMIM12Q96EX1 92 aa20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 PPP1R17O96001 155 aa20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 SCN5AQ14524 2016 aa20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 CD8AP01732 235 aa20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 TFF3Q07654 80 aa20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 SIGLEC5O15389 551 aa20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 Q0VFX4 171 aa20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 RTBDNQ9BSG5 229 aaPredicted RBP20.94■□□□□ 0.94
SPIRE1-202ENST00000409402 M0R381 172 aa20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 OR10AG1Q8NH19 301 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms