RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 AMMECR1Q9Y4X0 333 aaPredicted RBP19.97■□□□□ 0.79
DNMT3A-206ENST00000406659 SPTBN1Q01082 2364 aaKnown RBP19.97■□□□□ 0.79
DNMT3A-206ENST00000406659 C22orf46C9J442 243 aa19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 BUB1B-PAK6H3BSN5 160 aa19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 EIF3GO75821 320 aaKnown RBP eCLIP19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 IGLV2-23P01705 113 aa19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 ATF4P18848 351 aaPredicted RBP19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 OPRK1P41145 380 aa19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 LGALS7P47929 136 aa19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 AWAT1Q58HT5 328 aa19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 RPS10P5Q9NQ39 176 aa19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 NDUFA4L2Q9NRX3 87 aa19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 LRBAP50851 2863 aa19.96■□□□□ 0.79
DNMT3A-206ENST00000406659 IGHV3-72A0A0B4J1Y9 119 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 C19orf84I3L1E1 186 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 SNRNP70P08621 437 aaKnown RBP19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 CDKN1AP38936 164 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 ARSJQ5FYB0 599 aaPredicted RBP19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 RBMS3Q6XE24 437 aaKnown RBP19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 CYB561D1Q8N8Q1 229 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 MGST2Q99735 147 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 INSIG2Q9Y5U4 225 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 HMGB3O15347 200 aaKnown RBP19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 PMS2P11Q13670 270 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 C2orf83Q53S99 150 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 MOB3BQ86TA1 216 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 RAB24Q969Q5 203 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 SSBP3Q9BWW4 388 aaPredicted RBP19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 VAX2Q9UIW0 290 aa19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 PUS1Q9Y606 427 aaKnown RBP eCLIP19.95■□□□□ 0.78
DNMT3A-206ENST00000406659 LOC105371242A0A075B767 164 aa19.94■□□□□ 0.78
DNMT3A-206ENST00000406659 ERHP84090 104 aaKnown RBP19.94■□□□□ 0.78
DNMT3A-206ENST00000406659 PNKDQ8N490 385 aa19.94■□□□□ 0.78
DNMT3A-206ENST00000406659 OR10W1Q8NGF6 305 aa19.94■□□□□ 0.78
DNMT3A-206ENST00000406659 C20orf24Q9BUV8 137 aa19.94■□□□□ 0.78
DNMT3A-206ENST00000406659 GGTLC1Q9BX51 225 aa19.94■□□□□ 0.78
DNMT3A-206ENST00000406659 SMCO4Q9NRQ5 59 aa19.94■□□□□ 0.78
DNMT3A-206ENST00000406659 KCNIP2Q9NS61 270 aa19.94■□□□□ 0.78
DNMT3A-206ENST00000406659 A0A1W2PN81 502 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 FNDC10F2Z333 226 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 SLC25A17O43808 307 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 CHRNA7P36544 502 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 GPR6P46095 362 aaPredicted RBP19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 CDC34P49427 236 aaPredicted RBP19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 RAB31Q13636 194 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 TEPPQ6URK8 271 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 ZNF430Q9H8G1 570 aaPredicted RBP19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 LSM4Q9Y4Z0 139 aaKnown RBP19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 TNCP24821 2201 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 IGHV1-3A0A0C4DH29 117 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 C7orf77A4D0Y5 90 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 ARF6P62330 175 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 RPEQ96AT9 228 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 RITA1Q96K30 269 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 PXMP4Q9Y6I8 212 aa19.93■□□□□ 0.78
DNMT3A-206ENST00000406659 HRNRQ86YZ3 2850 aaPredicted RBP19.92■□□□□ 0.78
DNMT3A-206ENST00000406659 RNASE2P10153 161 aaKnown RBP19.92■□□□□ 0.78
DNMT3A-206ENST00000406659 AKR1C3P42330 323 aa19.92■□□□□ 0.78
DNMT3A-206ENST00000406659 BSXQ3C1V8 233 aa19.92■□□□□ 0.78
DNMT3A-206ENST00000406659 OR4P4Q8NGL7 312 aa19.92■□□□□ 0.78
DNMT3A-206ENST00000406659 SEC14L6B5MCN3 397 aa19.91■□□□□ 0.78
DNMT3A-206ENST00000406659 RHEBQ15382 184 aa19.91■□□□□ 0.78
DNMT3A-206ENST00000406659 MIC13Q5XKP0 118 aa19.91■□□□□ 0.78
DNMT3A-206ENST00000406659 C1orf159Q96HA4 380 aa19.91■□□□□ 0.78
DNMT3A-206ENST00000406659 P2RX4Q99571 388 aa19.91■□□□□ 0.78
DNMT3A-206ENST00000406659 TMPRSS5Q9H3S3 457 aa19.91■□□□□ 0.78
DNMT3A-206ENST00000406659 A0A1W2PPV4 95 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 A6NNC1 897 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 INS-IGF2F8WCM5 200 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 H3BQ15 152 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 GCSAMLQ5JQS6 135 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 IQCF2Q8IXL9 164 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 TEX45Q8NA69 505 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 C17orf50Q8WW18 174 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 M0R1W7 72 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 YIF1AO95070 293 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 PSMB3P49720 205 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 SSMEM1Q8WWF3 244 aa19.9■□□□□ 0.78
DNMT3A-206ENST00000406659 LOC105371267A0A1B0GV96 52 aa19.89■□□□□ 0.77
DNMT3A-206ENST00000406659 NDUFS7O75251 213 aa19.89■□□□□ 0.77
DNMT3A-206ENST00000406659 IGFBP2P18065 325 aa19.89■□□□□ 0.77
DNMT3A-206ENST00000406659 TAGLN2P37802 199 aaKnown RBP19.89■□□□□ 0.77
DNMT3A-206ENST00000406659 EFNA4P52798 201 aa19.89■□□□□ 0.77
DNMT3A-206ENST00000406659 MANBALQ9NQG1 85 aa19.89■□□□□ 0.77
DNMT3A-206ENST00000406659 E7EUB6 86 aa19.88■□□□□ 0.77
DNMT3A-206ENST00000406659 LY6LH3BQJ8 138 aa19.88■□□□□ 0.77
DNMT3A-206ENST00000406659 C10orf55Q5SWW7 151 aa19.88■□□□□ 0.77
DNMT3A-206ENST00000406659 SLC35E3Q7Z769 313 aa19.88■□□□□ 0.77
DNMT3A-206ENST00000406659 NIPSNAP3BQ9BS92 247 aa19.88■□□□□ 0.77
DNMT3A-206ENST00000406659 SIRT7Q9NRC8 400 aa19.88■□□□□ 0.77
DNMT3A-206ENST00000406659 TPSG1Q9NRR2 321 aa19.88■□□□□ 0.77
DNMT3A-206ENST00000406659 DEFA4P12838 97 aa19.88■□□□□ 0.77
DNMT3A-206ENST00000406659 B2MP61769 119 aa19.88■□□□□ 0.77
DNMT3A-206ENST00000406659 RPL29P47914 159 aaKnown RBP19.87■□□□□ 0.77
DNMT3A-206ENST00000406659 SUB1P53999 127 aaKnown RBP eCLIP19.87■□□□□ 0.77
DNMT3A-206ENST00000406659 TMEM144Q7Z5S9 345 aa19.87■□□□□ 0.77
DNMT3A-206ENST00000406659 TVP23CQ96ET8 276 aa19.87■□□□□ 0.77
DNMT3A-206ENST00000406659 CGB1A6NKQ9 187 aa19.86■□□□□ 0.77
DNMT3A-206ENST00000406659 PSG5Q15238 335 aa19.86■□□□□ 0.77
DNMT3A-206ENST00000406659 MMD2Q8IY49 270 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms