RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 GAGE6Q13070 117 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 SLC23A3Q6PIS1 610 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 MOB1BQ7L9L4 216 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 OR5P3Q8WZ94 311 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 SNAI2O43623 268 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 MRPL33O75394 65 aaKnown RBP13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 FTH1P19P0C7X4 201 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 LCN12Q6JVE5 192 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 ST6GALNAC6Q969X2 333 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 TMEM204Q9BSN7 226 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 PMCHL1Q16048 86 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 ALKBH6Q3KRA9 238 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 PERPQ96FX8 193 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 SPATA25Q9BR10 227 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 A0A096LPE4 126 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 A0A1W2PPZ6 126 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 K7EP34 96 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 ZNHIT1O43257 154 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 PMCHP20382 165 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 GPR12P47775 334 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 IL11RAQ14626 422 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 KIAA2026Q5HYC2 2103 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 WIPI1Q5MNZ9 446 aaPredicted RBP13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 DOLPP1Q86YN1 238 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 AP1S3Q96PC3 154 aa13.5□□□□□ -0.25
COL4A3BP-204ENST00000405807 ANKRD30BLA7E2S9 258 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 C1QTNF9BB2RNN3 333 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 C11orf94C9JXX5 98 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 KLF7O75840 302 aaPredicted RBP13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 PPP1CBP62140 327 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 GNG3P63215 75 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 IGFBP7Q16270 282 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 TRAT1Q6PIZ9 186 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 PRDM6Q9NQX0 595 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 SERTAD4Q9NUC0 356 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 TRAPPC2LQ9UL33 140 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 F2RL2O00254 374 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 ADH4P08319 380 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 RFPL3SP0C7P2 107 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 SSTR5P35346 364 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 DRAM1Q8N682 238 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 PRRG4Q9BZD6 226 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 BOKQ9UMX3 212 aaPredicted RBP13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 MPC1Q9Y5U8 109 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 LY6G6EA0A0G2JKS1 128 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 M0QXV9 152 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 MLNRO43193 412 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 YPEL3P61236 119 aaPredicted RBP13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 ABHD17BQ5VST6 288 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 JKAMPQ9P055 326 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 U3KQA8 63 aa13.49□□□□□ -0.25
COL4A3BP-204ENST00000405807 C17orf112F2Z3M2 114 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 NGFP01138 241 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 PLA2G5P39877 138 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 TGFBR3Q03167 851 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 SIRPB1O00241 398 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 SS18L1O75177 396 aaPredicted RBP13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 S1PR2O95136 353 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 CFHR2P36980 270 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 FOXL1Q12952 345 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 NPCDR1Q9BY65 106 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 PKIBQ9C010 78 aa13.48□□□□□ -0.25
COL4A3BP-204ENST00000405807 TMEM265A0A087WTH1 108 aa13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 NPPCP23582 126 aa13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 Q6P435 159 aa13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 ERG28Q9UKR5 140 aa13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 MRPS17Q9Y2R5 130 aaKnown RBP13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 TMPRSS2O15393 492 aa13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 CBLN1P23435 193 aa13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 HIST1H1AQ02539 215 aaPredicted RBP13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 Q0VG73 95 aa13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 ZNF497Q6ZNH5 498 aa13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 OR2K2Q8NGT1 345 aa13.47□□□□□ -0.25
COL4A3BP-204ENST00000405807 PRR33A8MZF0 331 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 ZNF418Q8TF45 676 aaPredicted RBP13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 VCX2Q9H322 139 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 ZNF407Q9C0G0 2248 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 PSMB11A5LHX3 300 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 LRRC30A6NM36 301 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 PMS2P5A8MQ11 134 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 KRASP01116 189 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 TFF3Q07654 80 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 OR52E5Q8NH55 327 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 JMJD8Q96S16 334 aa13.46□□□□□ -0.25
COL4A3BP-204ENST00000405807 TNRC6AQ8NDV7 1962 aaKnown RBP13.46□□□□□ -0.26
COL4A3BP-204ENST00000405807 CEP192Q8TEP8 1941 aa13.46□□□□□ -0.26
COL4A3BP-204ENST00000405807 IGKV3D-15A0A087WSY6 115 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 ZBTB34Q8NCN2 500 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 CT55Q8WUE5 264 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 CLEC7AQ9BXN2 247 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 HSPB8Q9UJY1 196 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 C3orf80F5H4A9 247 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 CGAP01215 116 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 SPINK2P20155 84 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 G6PCP35575 357 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 TMPRSS3P57727 454 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 UBALD1Q8TB05 177 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 BORCS7Q96B45 105 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms