RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 NDUFA4L2Q9NRX3 87 aa22.96■■□□□ 1.27
USP42-202ENST00000404008 INMT-MINDY4F8WBC2 141 aa22.95■■□□□ 1.26
USP42-202ENST00000404008 IL5P05113 134 aa22.95■■□□□ 1.26
USP42-202ENST00000404008 FOXE3Q13461 319 aa22.95■■□□□ 1.26
USP42-202ENST00000404008 OR5M8Q8NGP6 311 aa22.95■■□□□ 1.26
USP42-202ENST00000404008 SPATA3Q8NHX4 192 aa22.95■■□□□ 1.26
USP42-202ENST00000404008 ZNF431Q8TF32 576 aaPredicted RBP22.95■■□□□ 1.26
USP42-202ENST00000404008 CACNG5Q9UF02 275 aa22.95■■□□□ 1.26
USP42-202ENST00000404008 TRAPPC2P0DI81 140 aa22.94■■□□□ 1.26
USP42-202ENST00000404008 TRAPPC2BP0DI82 140 aa22.94■■□□□ 1.26
USP42-202ENST00000404008 PSMB8P28062 276 aa22.94■■□□□ 1.26
USP42-202ENST00000404008 AARDQ4LEZ3 155 aa22.94■■□□□ 1.26
USP42-202ENST00000404008 HIST2H2BDQ6DRA6 164 aa22.94■■□□□ 1.26
USP42-202ENST00000404008 THOC7Q6I9Y2 204 aaKnown RBP22.94■■□□□ 1.26
USP42-202ENST00000404008 RNF152Q8N8N0 203 aa22.94■■□□□ 1.26
USP42-202ENST00000404008 OR5T1Q8NG75 326 aa22.94■■□□□ 1.26
USP42-202ENST00000404008 SRSF8Q9BRL6 282 aaKnown RBP22.94■■□□□ 1.26
USP42-202ENST00000404008 TMED3Q9Y3Q3 217 aa22.94■■□□□ 1.26
USP42-202ENST00000404008 ST8SIA3O43173 380 aa22.93■■□□□ 1.26
USP42-202ENST00000404008 ELANEP08246 267 aa22.93■■□□□ 1.26
USP42-202ENST00000404008 CD83Q01151 205 aa22.93■■□□□ 1.26
USP42-202ENST00000404008 SHISA2Q6UWI4 295 aa22.93■■□□□ 1.26
USP42-202ENST00000404008 FAM110DQ8TAY7 271 aaPredicted RBP22.93■■□□□ 1.26
USP42-202ENST00000404008 CTNNBIP1Q9NSA3 81 aaPredicted RBP22.93■■□□□ 1.26
USP42-202ENST00000404008 IGLC7A0M8Q6 106 aa22.92■■□□□ 1.26
USP42-202ENST00000404008 HOXB5P09067 269 aa22.92■■□□□ 1.26
USP42-202ENST00000404008 SULT1A3P0DMM9 295 aa22.92■■□□□ 1.26
USP42-202ENST00000404008 SULT1A4P0DMN0 295 aa22.92■■□□□ 1.26
USP42-202ENST00000404008 HSPE1P61604 102 aaKnown RBP22.92■■□□□ 1.26
USP42-202ENST00000404008 TTC9CQ8N5M4 171 aa22.92■■□□□ 1.26
USP42-202ENST00000404008 OR10W1Q8NGF6 305 aa22.92■■□□□ 1.26
USP42-202ENST00000404008 CITED2Q99967 270 aaPredicted RBP22.92■■□□□ 1.26
USP42-202ENST00000404008 HINT2Q9BX68 163 aa22.92■■□□□ 1.26
USP42-202ENST00000404008 COA4Q9NYJ1 87 aa22.92■■□□□ 1.26
USP42-202ENST00000404008 AREGP15514 252 aa22.91■■□□□ 1.26
USP42-202ENST00000404008 PRCDQ00LT1 54 aa22.91■■□□□ 1.26
USP42-202ENST00000404008 SMCO1Q147U7 214 aa22.91■■□□□ 1.26
USP42-202ENST00000404008 NPIPB5A8MRT5 1133 aa22.9■■□□□ 1.26
USP42-202ENST00000404008 PRAF2O60831 178 aa22.9■■□□□ 1.26
USP42-202ENST00000404008 ADAP1O75689 374 aa22.9■■□□□ 1.26
USP42-202ENST00000404008 PF4V1P10720 104 aa22.9■■□□□ 1.26
USP42-202ENST00000404008 RGS21Q2M5E4 152 aa22.9■■□□□ 1.26
USP42-202ENST00000404008 CXorf66Q5JRM2 361 aaPredicted RBP22.9■■□□□ 1.26
USP42-202ENST00000404008 GGNBP1Q5YKI7 109 aa22.9■■□□□ 1.26
USP42-202ENST00000404008 LCNL1Q6ZST4 164 aa22.9■■□□□ 1.26
USP42-202ENST00000404008 KLK15Q9H2R5 256 aa22.9■■□□□ 1.26
USP42-202ENST00000404008 A0A1B0GU03 582 aa22.89■■□□□ 1.26
USP42-202ENST00000404008 DHFRP00374 187 aa22.89■■□□□ 1.26
USP42-202ENST00000404008 RPLP1P05386 114 aaKnown RBP22.89■■□□□ 1.26
USP42-202ENST00000404008 WT1-ASQ06250 92 aa22.89■■□□□ 1.26
USP42-202ENST00000404008 HSD17B13Q7Z5P4 300 aaPredicted RBP22.89■■□□□ 1.26
USP42-202ENST00000404008 PDCD10Q9BUL8 212 aa22.89■■□□□ 1.26
USP42-202ENST00000404008 TCRBV4S1A1TA0A5B7 111 aa22.89■■□□□ 1.25
USP42-202ENST00000404008 H3BUA1 57 aa22.89■■□□□ 1.25
USP42-202ENST00000404008 IFNA17P01571 189 aa22.89■■□□□ 1.25
USP42-202ENST00000404008 REG1AP05451 166 aa22.89■■□□□ 1.25
USP42-202ENST00000404008 CRYGCP07315 174 aa22.89■■□□□ 1.25
USP42-202ENST00000404008 SLC25A6P12236 298 aa22.89■■□□□ 1.25
USP42-202ENST00000404008 PSMB6P28072 239 aa22.89■■□□□ 1.25
USP42-202ENST00000404008 TMEM65Q6PI78 240 aa22.89■■□□□ 1.25
USP42-202ENST00000404008 GPN1Q9HCN4 374 aaPredicted RBP22.89■■□□□ 1.25
USP42-202ENST00000404008 BRI3O95415 125 aa22.88■■□□□ 1.25
USP42-202ENST00000404008 CTRB1P17538 263 aa22.88■■□□□ 1.25
USP42-202ENST00000404008 RAB9AP51151 201 aa22.88■■□□□ 1.25
USP42-202ENST00000404008 PDLIM3Q53GG5 364 aaPredicted RBP22.88■■□□□ 1.25
USP42-202ENST00000404008 CTRB2Q6GPI1 263 aa22.88■■□□□ 1.25
USP42-202ENST00000404008 C12orf45Q8N5I9 185 aaPredicted RBP22.88■■□□□ 1.25
USP42-202ENST00000404008 OR52E5Q8NH55 327 aa22.88■■□□□ 1.25
USP42-202ENST00000404008 MYOZ3Q8TDC0 251 aa22.88■■□□□ 1.25
USP42-202ENST00000404008 TSSC4Q9Y5U2 329 aaPredicted RBP22.88■■□□□ 1.25
USP42-202ENST00000404008 OR13C7P0DN81 318 aa22.87■■□□□ 1.25
USP42-202ENST00000404008 SPINK9Q5DT21 86 aa22.87■■□□□ 1.25
USP42-202ENST00000404008 C19orf35Q6ZS72 473 aa22.87■■□□□ 1.25
USP42-202ENST00000404008 MS4A10Q96PG2 267 aa22.87■■□□□ 1.25
USP42-202ENST00000404008 SLA2Q9H6Q3 261 aa22.87■■□□□ 1.25
USP42-202ENST00000404008 ZNF355PQ9NSJ1 428 aa22.87■■□□□ 1.25
USP42-202ENST00000404008 SNRPGP15A8MWD9 76 aa22.86■■□□□ 1.25
USP42-202ENST00000404008 PITX3O75364 302 aa22.86■■□□□ 1.25
USP42-202ENST00000404008 IFNA21P01568 189 aa22.86■■□□□ 1.25
USP42-202ENST00000404008 SPCS3P61009 180 aa22.86■■□□□ 1.25
USP42-202ENST00000404008 NDUFA11Q86Y39 141 aa22.86■■□□□ 1.25
USP42-202ENST00000404008 PLEKHA3Q9HB20 300 aa22.86■■□□□ 1.25
USP42-202ENST00000404008 ZFP57Q9NU63 452 aa22.86■■□□□ 1.25
USP42-202ENST00000404008 CACFD1Q9UGQ2 172 aa22.86■■□□□ 1.25
USP42-202ENST00000404008 ADARB2-AS1A8MUL3 147 aa22.85■■□□□ 1.25
USP42-202ENST00000404008 MPTX1A8MV57 137 aa22.85■■□□□ 1.25
USP42-202ENST00000404008 KIAA0141Q14154 515 aaPredicted RBP22.85■■□□□ 1.25
USP42-202ENST00000404008 KHDC1LQ5JSQ8 128 aa22.85■■□□□ 1.25
USP42-202ENST00000404008 UXS1Q8NBZ7 420 aa22.85■■□□□ 1.25
USP42-202ENST00000404008 OR1S1Q8NH92 325 aa22.85■■□□□ 1.25
USP42-202ENST00000404008 PRH1P02810 166 aa22.84■■□□□ 1.25
USP42-202ENST00000404008 TPPP2P59282 170 aa22.84■■□□□ 1.25
USP42-202ENST00000404008 RPL23AP62750 156 aaKnown RBP22.84■■□□□ 1.25
USP42-202ENST00000404008 MRPL41Q8IXM3 137 aaKnown RBP22.84■■□□□ 1.25
USP42-202ENST00000404008 HSPB7Q9UBY9 170 aa22.84■■□□□ 1.25
USP42-202ENST00000404008 INS-IGF2F8WCM5 200 aa22.83■■□□□ 1.25
USP42-202ENST00000404008 NXPH3O95157 252 aa22.83■■□□□ 1.25
USP42-202ENST00000404008 TRGV3P03979 118 aa22.83■■□□□ 1.25
USP42-202ENST00000404008 TNFRSF9Q07011 255 aa22.83■■□□□ 1.25
USP42-202ENST00000404008 ZNF491Q8N8L2 437 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms