RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 MIC13Q5XKP0 118 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 SLC25A28Q96A46 364 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 PARP14Q460N5 1801 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 DIDO1Q9BTC0 2240 aaKnown RBP8.18□□□□□ -1.1
SMAD9-203ENST00000399275 IGKCP01834 107 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 ICAM4Q14773 271 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 LCN12Q6JVE5 192 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 DEFB108BQ8NET1 73 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 LOXL2Q9Y4K0 774 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 A0A1W2PRE2 83 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 C4orf51C9J302 202 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 NPIPB11E5RHQ5 1161 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 HBDP02042 147 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 CT83Q5H943 113 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 LRTM2Q8N967 370 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 RASL11BQ9BPW5 248 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 FAM60AQ9NP50 221 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 C17orf51A8MQB3 221 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 IGHV3-9P01782 118 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 ZNF688P0C7X2 276 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 ZNF32P17041 273 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 ANOS1P23352 680 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 PLNP26678 52 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 C16orf54Q6UWD8 224 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 ANKRD36A6QL64 1941 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 IGKV1D-42A0A075B6H8 117 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 M0R2P5 195 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 SMIM10L1P0DMW3 83 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 LHX8Q68G74 356 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 C8orf44Q96CB5 159 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 SMIM10Q96HG1 83 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.17□□□□□ -1.1
SMAD9-203ENST00000399275 A0A1B0GUT8 65 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 H3BMM0 161 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 PTGDSP41222 190 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 ZNF83P51522 516 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 C9orf50Q5SZB4 431 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 UBE2WQ96B02 151 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 CTHRC1Q96CG8 243 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 PILRAQ9UKJ1 303 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 CD33P20138 364 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 WDR82Q6UXN9 313 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 KCNK17Q96T54 332 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 PRNDQ9UKY0 176 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 HIGD1AQ9Y241 93 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 BRWD1Q9NSI6 2320 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 K7ESF4 209 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
SMAD9-203ENST00000399275 KHDC1LQ5JSQ8 128 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
SMAD9-203ENST00000399275 SF3B5Q9BWJ5 86 aaKnown RBP8.17□□□□□ -1.1
SMAD9-203ENST00000399275 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 C8orf88P0DMB2 117 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 GCHFRP30047 84 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 ALKBH6Q3KRA9 238 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 MOB3BQ86TA1 216 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 COQ2Q96H96 371 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 MPC1Q9Y5U8 109 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 GBF1Q92538 1859 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 TRBV6-7A0A0A0MS04 114 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A10PA6NDY2 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A18PA6NE21 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A16PA6NEW6 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A20PA6NIJ5 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A8PA6NJQ4 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A7PA6NKC0 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A22PA8MWA6 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A12PA8MX19 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A5PA8MXJ8 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A23PA8MXZ1 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A15PP0C7V4 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A13PP0C7W8 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A14PP0C7W9 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FAM90A24PP0C7X0 464 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 IGFBP3P17936 291 aaPredicted RBP8.16□□□□□ -1.1
SMAD9-203ENST00000399275 PIGYQ3MUY2 71 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 RTBDNQ9BSG5 229 aaPredicted RBP8.16□□□□□ -1.1
SMAD9-203ENST00000399275 U3KQE9 123 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 DICER1Q9UPY3 1922 aaKnown RBP8.16□□□□□ -1.1
SMAD9-203ENST00000399275 A0A096LPE4 126 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 IGHV3-43A0A0B4J1X8 118 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 A0A1W2PPZ6 126 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 IGHV3-43DP0DP04 118 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 LOXL3P58215 753 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 GFI1Q99684 422 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 ZNF703Q9H7S9 590 aaPredicted RBP8.16□□□□□ -1.1
SMAD9-203ENST00000399275 LEPP41159 167 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 LINC01551Q86U37 167 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 STPG4Q8N801 248 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 PLXNA1Q9UIW2 1896 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 WNT2P09544 360 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 IGLC2P0DOY2 106 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 IGLC3P0DOY3 106 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 SRSF2Q01130 221 aaKnown RBP8.16□□□□□ -1.1
SMAD9-203ENST00000399275 KCNMB1Q16558 191 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 IFI27L1Q96BM0 104 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 GPR82Q96P67 336 aa8.16□□□□□ -1.1
SMAD9-203ENST00000399275 GPR35Q9HC97 309 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms