RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ATG12O94817 140 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SRPXP78539 464 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 WT1-ASQ06250 92 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 DCTN2Q13561 401 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 C11orf87Q6NUJ2 197 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ZNF429Q86V71 674 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 FAM219AQ8IW50 185 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 C3orf56Q8N813 242 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OR5T1Q8NG75 326 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OR1L8Q8NGR8 309 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SPATA3Q8NHX4 192 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 MITD1Q8WV92 249 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 RRNAD1Q96FB5 475 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 FYTTD1Q96QD9 318 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SPIN2AQ99865 258 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SPIN2BQ9BPZ2 258 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CACNG5Q9UF02 275 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 DUXBA0A1W2PPF3 345 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 MPTX1A8MV57 137 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 INMT-MINDY4F8WBC2 141 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PTTG1O95997 202 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 IL5P05113 134 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 RPLP1P05386 114 aaKnown RBP9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 REG1AP05451 166 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SLC35B1P78383 322 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 DEFA5Q01523 94 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 FOXE3Q13461 319 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 GGNBP1Q5YKI7 109 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TEX38Q6PEX7 206 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PLET1Q6UQ28 207 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 C18orf65Q6ZTR6 163 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TTC9CQ8N5M4 171 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OR5B3Q8NH48 314 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OR4A16Q8NH70 328 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 FAM110DQ8TAY7 271 aaPredicted RBP9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ZNF431Q8TF32 576 aaPredicted RBP9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PHB2Q99623 299 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 COMMD5Q9GZQ3 224 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ZNF257Q9Y2Q1 563 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 DMRT1Q9Y5R6 373 aa9.67□□□□□ -0.86
HLA-DQB1-203ENST00000399082 NPIPB5A8MRT5 1133 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PITX3O75364 302 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PRH1P02810 166 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CRYGCP07315 174 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ELANEP08246 267 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 HOXB5P09067 269 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TRAPPC2P0DI81 140 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TRAPPC2BP0DI82 140 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CTRB1P17538 263 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 HSPE1P61604 102 aaKnown RBP9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PRCDQ00LT1 54 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TMEM267Q0VDI3 215 aaPredicted RBP9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 KLK9Q2XQG4 91 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SPINK9Q5DT21 86 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CTRB2Q6GPI1 263 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SHISA2Q6UWI4 295 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 COMMD1Q8N668 190 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OR4X2Q8NGF9 303 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OR5M8Q8NGP6 311 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 RNASE11Q8TAA1 199 aaKnown RBP9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TMEM68Q96MH6 324 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 GON7Q9BXV9 100 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 KLK9Q9UKQ9 250 aa9.66□□□□□ -0.86
HLA-DQB1-203ENST00000399082 BRI3O95415 125 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SULT1A3P0DMM9 295 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SULT1A4P0DMN0 295 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PF4V1P10720 104 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PSMB6P28072 239 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 RAB9AP51151 201 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 MFAP2P55001 183 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SMCO1Q147U7 214 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 C2orf68Q2NKX9 166 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PDLIM3Q53GG5 364 aaPredicted RBP9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TREML4Q6UXN2 200 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 COQ8AQ8NI60 647 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 MS4A10Q96PG2 267 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 FANCD2OSQ96PS1 177 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SRSF8Q9BRL6 282 aaKnown RBP9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 HINT2Q9BX68 163 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 COA4Q9NYJ1 87 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 FKBP11Q9NYL4 201 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TMED3Q9Y3Q3 217 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 VWFP04275 2813 aa9.65□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TRRAPQ9Y4A5 3859 aa9.65□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TRBV9A0A0B4J1U6 114 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 A0A1B0GU03 582 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TCRBV4S1A1TA0A5B7 111 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 H3BUA1 57 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 CCSO14618 274 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 NXPH3O95157 252 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 RPL23AP62750 156 aaKnown RBP9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OXA1LQ15070 435 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 CXorf66Q5JRM2 361 aaPredicted RBP9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 THOC7Q6I9Y2 204 aaKnown RBP9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 C12orf45Q8N5I9 185 aaPredicted RBP9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 ZNF491Q8N8L2 437 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OR52E5Q8NH55 327 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 GNB4Q9HAV0 340 aa9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.64□□□□□ -0.87
HLA-DQB1-203ENST00000399082 IGLV11-55A0A075B6I3 123 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms