RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SMIM18P0DKX4 95 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 CTF1Q16619 201 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 FAM106AQ4KMX7 169 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 PHLDA2Q53GA4 152 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 CADM3Q8N126 398 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 OR1L8Q8NGR8 309 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 THAP7Q9BT49 309 aaPredicted RBP10.16□□□□□ -0.78
VCX3A-202ENST00000398729 KRTAP17-1Q9BYP8 105 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 NAA50Q9GZZ1 169 aaKnown RBP10.16□□□□□ -0.78
VCX3A-202ENST00000398729 TEX50A0A1B0GTY4 177 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 MFSD2BA6NFX1 497 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 FOLR2P14207 255 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 ZNF182P17025 639 aaPredicted RBP10.15□□□□□ -0.78
VCX3A-202ENST00000398729 G6PCP35575 357 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 CD300EQ496F6 205 aaPredicted RBP10.15□□□□□ -0.78
VCX3A-202ENST00000398729 ZNF585BQ52M93 769 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 GPR107Q5VW38 600 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 ADAMTSL5Q6ZMM2 481 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 LAX1Q8IWV1 398 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 OR10W1Q8NGF6 305 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 TUBA4BQ9H853 241 aa10.15□□□□□ -0.78
VCX3A-202ENST00000398729 FAM212BQ9NTI7 297 aaPredicted RBP10.15□□□□□ -0.78
VCX3A-202ENST00000398729 TECRQ9NZ01 308 aaKnown RBP10.15□□□□□ -0.78
VCX3A-202ENST00000398729 ZNF320A2RRD8 509 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 CLEC3BP05452 202 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 SERPINE2P07093 398 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 OR13C7P0DN81 318 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 CBLN1P23435 193 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 UCP3P55916 312 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 DEFB114Q30KQ6 69 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 SLC38A6Q8IZM9 456 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 GDPD1Q8N9F7 314 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 LSM10Q969L4 123 aaKnown RBP10.14□□□□□ -0.79
VCX3A-202ENST00000398729 TSC22D3Q99576 134 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 TM2D3Q9BRN9 247 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 HINT2Q9BX68 163 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 NDUFA4L2Q9NRX3 87 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 SLC2A8Q9NY64 477 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 FKBP11Q9NYL4 201 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 PRNDQ9UKY0 176 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 OR51B2Q9Y5P1 312 aa10.14□□□□□ -0.79
VCX3A-202ENST00000398729 M0QYG6 137 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 IFNA6P05013 189 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 LYL1P12980 280 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 PTBP1P26599 531 aaKnown RBP eCLIP10.13□□□□□ -0.79
VCX3A-202ENST00000398729 GPR183P32249 361 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 CD81P60033 236 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 WT1-ASQ06250 92 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 GUCA2BQ16661 112 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 RNASE12Q5GAN4 147 aaKnown RBP10.13□□□□□ -0.79
VCX3A-202ENST00000398729 SLC25A24Q6NUK1 477 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 PLET1Q6UQ28 207 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 GPR141Q7Z602 305 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 TBC1D26Q86UD7 250 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 OR5B3Q8NH48 314 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 ZNF502Q8TBZ5 544 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 VN1R17PQ8TDU5 208 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 C15orf40Q8WUR7 153 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 TMEM56Q96MV1 263 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 MRPS26Q9BYN8 205 aaKnown RBP10.13□□□□□ -0.79
VCX3A-202ENST00000398729 EXTL2Q9UBQ6 330 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 NSG2Q9Y328 171 aa10.13□□□□□ -0.79
VCX3A-202ENST00000398729 TMEM213A2RRL7 107 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 ZNF785A8K8V0 405 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 A8MWP6 167 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 TPPPO94811 219 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 EDN2P20800 178 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 RNASE10Q5GAN6 216 aaKnown RBP10.12□□□□□ -0.79
VCX3A-202ENST00000398729 CACNG8Q8WXS5 425 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 NEURL2Q9BR09 285 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 PALMDQ9NP74 551 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 ZC4H2Q9NQZ6 224 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 KLK11Q9UBX7 282 aa10.12□□□□□ -0.79
VCX3A-202ENST00000398729 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 PGAM2P15259 253 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 TBPP20226 339 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 HAGHQ16775 308 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 ZNF57Q68EA5 555 aaPredicted RBP10.11□□□□□ -0.79
VCX3A-202ENST00000398729 H2BFWTQ7Z2G1 175 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 ARRDC1Q8N5I2 433 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 UXS1Q8NBZ7 420 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 OR1L6Q8NGR2 347 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 OR52I2Q8NH67 350 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 MARC2Q969Z3 335 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 ZNF486Q96H40 463 aaPredicted RBP10.11□□□□□ -0.79
VCX3A-202ENST00000398729 SEC22AQ96IW7 307 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 SPATA25Q9BR10 227 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 PLEKHA3Q9HB20 300 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 TMEM14BQ9NUH8 114 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 MTFP1Q9UDX5 166 aa10.11□□□□□ -0.79
VCX3A-202ENST00000398729 F11RQ9Y624 299 aaKnown RBP10.11□□□□□ -0.79
VCX3A-202ENST00000398729 RGS5O15539 181 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 TGOLN2O43493 480 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 CD3DP04234 171 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 CD7P09564 240 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 ALDH3B2P48448 385 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 ELLP55199 621 aaPredicted RBP10.1□□□□□ -0.79
VCX3A-202ENST00000398729 RND3P61587 244 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 TM4SF20Q53R12 229 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 UNQ9165/PRO28630Q6UXU0 137 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms